Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00438 ATGCTGTGTATATTACTCTATCAGCAGAGTTTTAAGAAAATGAGAGAACATATTCCAGAATCATGGCTAGTTATGATCACTGTGATATTGGCCACCGCAATATTTGCAAAACTAATTCAATTCAAGCTAAGGAAGGAAGATAAAAGCAAATGCAGATTACCACCAGGAAGGAGAGGCTGGCCTTTGATTGGTGACAGCATCAATTGGTACAATGCTGTTGCAAGTTCTCATCCTCCTCAGTTTGTTGAAGAAATGGTGAAGAGGTATGGTAAGATATTTTCATGCAGCCTATTTGGAAAATGGGCAGTGGTGTCAGCAGATCCAAGCTTCAACCGCTTTGTAATGCAAAATGAAGGCAGATTATTCATCTCAAGCTACCCAAAATCTTTCAGAGATTTGGTTGGTAAAAATGGTGTGATCACAGTGCAAGGAGAGCAACAAAGAAAACTACATGGAATTGCCTCCAATATGATGCGCCTAGAGAAGCTCAAGTTCCATTTCTTGAATGATATACAAAGTGTCATGATCCAAACTTTGAGCAATTTTAACAACAACCAAGTCATTTTTCTCCAGGATGTTTGTAGAAAAGTGGCTATACATTTAATGGTTAATCAACTATTGGGGGTTTCAAGTGAGTCTCAAGTCAATGAAATGGCGCAGTTGTTTTCTGACTTTGTTGATGGTTGTTTATCCATTCCCATCAACATTCCAGGCTATGCATACCACACTGCAATGAAGGCAAGGGAGAAAATCATAAGCAAGATAAACAAGATCATAGAGGCACATAGAAAAAATGGTGCTCCCATGGAAGGTAATGGAGTACTTGGAAGATTACTAGAGGAAGAAAGCTTGCCTGATGATGCTGTTGCAGATTTCATTATCAATCTTCTCTTTGCTGGAAATGAAACAACCACCAAAACAATGCTTTTTGCAGTCTATTTCCTTACTCAATGTCCAAGAGCCATGAACCAATTGCTGGAAGAACATGATTCTCTGAGAAGTAATTCTGGAGATGAATTGCTTACATGGCAGGATTATAAAGCAATGACATTCACTCAATGTGTTATTGATGAAACACTGAGACTTGGGGGTATTGCAATTTGGTTAATGAGAGAAGCAAAAGAAGACGTTCAATATCAAGATTTTGTTATTCCGAAAGGGTGCTTTGTGGTTCCATTTCTCTCAGCAGTCCATTTAGATGAGAATGTATACAGTGAACCTCTAAACTTCAATCCTTGGAGATGGATGGAGCCAGAAAATGAGGAAAAGAGAAACTGGAGAAGTAGTCCATTCTATGCACCCTTTGGAGGAGGTGCTAGATTTTGTCCAGGAGCAGAACTGGCTCGCCTTCAAATTGCTCTTTTTCTTCATTGCTTTCTGACTAACTATAGATGGACTCAGATGAAGGAAGATAGCATGTCATTCTTTCCCTCTGCTAGATTGGTCAATGGTTTTGAAATTCGCCTAACCAGAAGACATGATGATATTATTAATGAAACAAGTTAA 1506 0.3884 MLCILLYQQSFKKMREHIPESWLVMITVILATAIFAKLIQFKLRKEDKSKCRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEEMVKRYGKIFSCSLFGKWAVVSADPSFNRFVMQNEGRLFISSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLEKLKFHFLNDIQSVMIQTLSNFNNNQVIFLQDVCRKVAIHLMVNQLLGVSSESQVNEMAQLFSDFVDGCLSIPINIPGYAYHTAMKAREKIISKINKIIEAHRKNGAPMEGNGVLGRLLEEESLPDDAVADFIINLLFAGNETTTKTMLFAVYFLTQCPRAMNQLLEEHDSLRSNSGDELLTWQDYKAMTFTQCVIDETLRLGGIAIWLMREAKEDVQYQDFVIPKGCFVVPFLSAVHLDENVYSEPLNFNPWRWMEPENEEKRNWRSSPFYAPFGGGARFCPGAELARLQIALFLHCFLTNYRWTQMKEDSMSFFPSARLVNGFEIRLTRRHDDIINETS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00438 501 PANTHER CYTOCHROME P450 26 16 490 - -
Cca08g00438 501 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00438 501 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00438 501 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00438 501 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00438 501 PRINTS E-class P450 group IV signature 80 103 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00438 501 PRINTS E-class P450 group IV signature 290 316 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00438 501 PRINTS E-class P450 group IV signature 349 365 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00438 501 PRINTS E-class P450 group IV signature 398 416 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00438 501 PRINTS E-class P450 group IV signature 426 442 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00438 501 PRINTS E-class P450 group IV signature 442 460 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00438 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Cca08g00438 501 SUPERFAMILY Cytochrome P450 49 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00438 501 Pfam Cytochrome P450 54 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00438 501 PANTHER CYTOCHROME P450 SUPERFAMILY PROTEIN 16 490 - -
Cca08g00438 501 Gene3D Cytochrome P450 43 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00438 Cca-Chr8 6788621 6793799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00438 14 499 Cytochrome P450 AT1G73340 70.935 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00438 - - ccaj:109804308 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00438 08 6788621 6793799 Cca08g00438 08 6788621 6793799 ECH