Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00430 ATGTTTGATTCCTCCTTCTATGGAAGAAACGATGATCATTTTCAGCATTTTGTTGCTACTATGACACATCAGAGTCACCTGTGTCCGCTCCCTTTAACTGTACAATCCATCATCTGGAATTACCTCCATTGCCTTCATCTTTATCCATCTCCACACACGATAGTGTTAGGTGATATAAGTCAGCAGAAAACTTTCAATGACCGCATAGCCCGTCCGGGCTCAGTCCGAAACTTACATACCCGAGATTCTGTTCTTAGTCCCTTGTCTCCGGTTCAAACAGTTTCCGTCTCTTTCTGCTGCTTCGCTCTCTCTGAACTTTCATTGACGCTAGCAACCACCTTCGGCACGCTTCGTGTAACAGCACAATCAGGATAA 375 0.448 MFDSSFYGRNDDHFQHFVATMTHQSHLCPLPLTVQSIIWNYLHCLHLYPSPHTIVLGDISQQKTFNDRIARPGSVRNLHTRDSVLSPLSPVQTVSVSFCCFALSELSLTLATTFGTLRVTAQSG 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00430 124 Pfam DNA polymerase alpha/epsilon subunit B 11 63 IPR007185 GO:0003677|GO:0006260
Cca08g00430 124 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 11 77 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00430 Cca-Chr8 6667964 6672764 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00430 11 56 Core DNA Replication Machinery Family AT5G22110 67.391 1.08e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00430 K02325 - gmx:100784116 103.99