Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00392 CAGAAGAGTTTATGCTTTGCTGAATATGGTTCTTATTGGCGCAACATGCGCAAGATGTGCACATTGGAATTGTTAAGCGAAACCAAAATTAACTTCTTCAGACACATGAGGAAGGAGGAGCTTGACCTACTGATCAAGCTTGTAAGAGAGACCGCCAATGATGGAGCTGTTGTTGATCTTAGTGCCAAGGTTGCAACACTCAGTGCAGACATGGCTTGTAGAATGATTTTAGGGAAGAAGTACATGGACCAAGACTTGGATGAGAAGGGGTTCAAGGCTGTAATGCAAGAGCTAATGCACTTAGCAGCAACTCCTAACATAGGGGAATACATTCCTTACATTGGTAAACTTGACCTTCAAGGACTAACTAAGCGCATGATAGTAGTTGGAAAAATCTTCGATGACTTCTTTGAGAAAATTATTGATGAGCACTTGCAATCCGAGAAGGGAGAAGACAAGATGAAGGATTTTGTCAATGTCATGTTGGGCTTT 492 0.4167 QKSLCFAEYGSYWRNMRKMCTLELLSETKINFFRHMRKEELDLLIKLVRETANDGAVVDLSAKVATLSADMACRMILGKKYMDQDLDEKGFKAVMQELMHLAATPNIGEYIPYIGKLDLQGLTKRMIVVGKIFDDFFEKIIDEHLQSEKGEDKMKDFVNVMLGF 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00392 164 Coils Coil 162 164 - -
Cca08g00392 164 Gene3D Cytochrome P450 1 163 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00392 164 Pfam Cytochrome P450 3 162 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00392 164 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 164 - -
Cca08g00392 164 PANTHER CYTOCHROME P450 93A3-LIKE 1 164 - -
Cca08g00392 164 SUPERFAMILY Cytochrome P450 3 162 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00392 Cca-Chr8 6014221 6014712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00392 2 164 Cytochrome P450 AT1G11610 32.317 1.87e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00392 K20562 - gmx:100809526 280.411