Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00391 GATATTTTGGACGGTTCAATGGATACATCTGCTACAGCGATTGAGTGGACACTTTCAGAGCTCTTAAAGAATCCAAGGGTGATGAAAAAAGTCCAAATGGAGTTAGAAACTGTGGTGGGCATGAATAGGAAGGTAGAAGAATTAGACCTGGACAAGTTAGAGTATTTGGGAATGGTTGTAAAGGAAAGCTTGAGGCTCCATCCAGTGGCACCGTTACTACTACCACATCGATCAAGGGAAGATTGCATGATTGGAGAATTTTTCATACCCAAAAAATCAACTGTCATAATAAATGCATGGGCAATTATGCGAGACCCAAGTGTTTGGGATGAAGCTGAGAAGTTCTGGCCAGAGAGATTTGAAGGAAGAAACATAGATTTGAGAGGACGAGACTTCCAATTAATACCATTTGGGTCTGGCAGAAGGATCTGGCCAGGAATGCAAATAAGAGCGTCTCTCCGGATTGCTTATAAGCAATCCACCAAAGATGGTCTAAGTATGGTTCGTCTGATAGTGGCTCAGCTTGTGCATTGTTTTGATTGGAAGCTACCAAATGACATGTTGCCATCTGACTTGGACATGACAGAGGCGTTCGGCCTTGCAATGCCTAGAGCCAATCATCTGGTTGCCATTCCTACGTATCGACTTTTTAATGAAAGGGACTAG 666 0.4309 DILDGSMDTSATAIEWTLSELLKNPRVMKKVQMELETVVGMNRKVEELDLDKLEYLGMVVKESLRLHPVAPLLLPHRSREDCMIGEFFIPKKSTVIINAWAIMRDPSVWDEAEKFWPERFEGRNIDLRGRDFQLIPFGSGRRIWPGMQIRASLRIAYKQSTKDGLSMVRLIVAQLVHCFDWKLPNDMLPSDLDMTEAFGLAMPRANHLVAIPTYRLFNERD 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00391 221 PRINTS E-class P450 group I signature 14 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00391 221 PRINTS E-class P450 group I signature 98 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00391 221 PRINTS E-class P450 group I signature 57 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00391 221 PRINTS E-class P450 group I signature 134 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00391 221 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 216 - -
Cca08g00391 221 PRINTS P450 superfamily signature 135 144 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00391 221 PRINTS P450 superfamily signature 5 22 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00391 221 PRINTS P450 superfamily signature 58 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00391 221 PANTHER CYTOCHROME P450 93A3-LIKE 1 216 - -
Cca08g00391 221 Pfam Cytochrome P450 3 201 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00391 221 SUPERFAMILY Cytochrome P450 3 215 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00391 221 Gene3D Cytochrome P450 1 215 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00391 Cca-Chr8 6013098 6013885 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00391 1 216 Monolignol Biosynthesis Gene Families AT4G36220 50.230 2.38e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00391 K20562 - gmx:100809526 348.206