Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00355 ATGGCAGACACAAATTCAGTTGAAGTGATTTTGGATTTTCTGAGGAGGAATCGGTTCACTCGGGCTGAGGCAGCTTTGCGTAGTGAGCTCAGTAACTGTTCTGATGTGAATGGTTTCCTTCAGAAGCTTACATTGGAAGAGAAGGACTTGCGTGGTGTGTTGCAGAATGATAAGGGGAAGCCTGTGGTAGAAAATCAAGGGTCGGATTCTCTTGATGGTGTTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATAGAGTGCAGGACTGGTAAAAATGCTGCTGAAAGCAAATGGAAAACTGTTGCTCCCACTGTGGAAAGGAATAAGTCTAATGAAGTGGTAGGGACGAGTGACAAAAACTTCACTTTTTCTAAGAGTTCGGAGGACAGTGTTCTTGATTTGTACTCATGGAAGTATAATCTCAGCAATGGTCCTTCGGAGCCTTGCCAAAATGATGTTGGAAGTAGGCCTAATAATGCTTTGAAGGCCCCAATATCTCAGCAACCTAAGTATCAAACTAGTGAAGCTCCTGATGCAACCAACAGTAATGTGAAATCTAGGGAGGAAAATAATGTGCCTGCTGAAAGATCAACCTCATGGCTCGGAAATAGTGGTAAAGCCTCCACAGAACCGAAGTATGACCTTATGCAAAGCAAAGATCCTAGGGAACTTGATCGGCAGCTTAAATTCAATGTTTCATCTCTTAAAGAGAACTTGACTGATAATGTCTTGTCAAGAACCGATGAGAATGTGAGTTCATCTACAGACCTATGGAAAGATTGTACTGTCAAGACTGTTTTCCCTTTCTCAATGGGGGACATGTCTACAAGCTACAACGGTTCAACTTATTCTGACAGAAAAGAAGAAAAGAGAAAGGCAGAAAAGAGTGATGTTAGGGCATCAATAAAAGAAGAAGTGGATGAAGTGGGAAGAGCTCTTTACTTAGGAAAGTTGCAAGGCAGTTCTGGTGGCTTAAGTTTTCCTCTTGCACCGGAGAATCAGAAGGAAGAGTTTCCTAGGCTTCCTCCTGTAAAAATCAAGTCAGAAGATAAGCCTTTGACTTTTAATTGGGGGGATAAGTTTGAGTGTGATGGACTGGCTGTGAAACTCCCTGGTGCTGACAACACCTTACTTATTGGTTCATATCTGGATGTCCCTATTGGGCAAGACATTAAAACTACAGGTGCGAGGAAGGCTATGGGGGGCAGTTGGCTGTCTGTAAGTCAAGGGATTGCAGAGGATACATGCGATCTTGTATCAGGCTTTGCAACAGTTGGGGATGGGTTGAGTGAATCTGTTGATTATCCAAATGAATATTGGGACTCTGATGAATATGAGGACGATGAAGATGTTGGGTACATGAGACAACCTATTGAGGATGAGGCCTGGTTTTTGGCACATGAAATTGATTACCCTAGTGACAATGAAAAGGGAACAGCGCATGGAAGTGTTCCAGATCCTCAGGAAAGGGGTCCAGCCAAAGATGAGGAGGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTCTCTGGTGAGCAATATATCATATCAAAAAATGTTGAGCCGGTCACTGCTTCTGGTGATCCTATCGGTCTAACGATTACTGAAATGTATGGAAGAACTAATGGTAATGATGGAATGGCCCAATATGATAGACAAATGATGGATGTCGAAGAACTGAATCTGATGCATATGGAACCTGTCAGGCAGGGCTTTGCCACTCACAAAAATGATCTCTCCATGCTGGGAGATGGGAAGGTTCTGAATCATGTTGCGAGGTCACGAATTGAGGACATGGAAGATGATCAACATGGTTCTGTTAGATCAATTGGGGTGGGGATCAACAGTGATGCTGCTGATATTGGTAGTGAAGTGCATGGAAGTTTGGTTGGTGGTAGTAGTGAGGGGGATTTAGATTATTTCCGTGATCATGATACTTTGCACAGTGGCTCCAAACACTCCTCTCATCATGATTTGGATAAGAGCTCTATTAACAAATCATTCAAAAATAATAAGAAAAATGACAAGACCGAATCAAATAAATATATCATTGACGGTGATAAAGATGGATGCTCACAGGTAAAATCACATACTGATGGGAACTTCTCATTTCCCCAATCTCTTAGAGATGGTCACATGATTCAGGCTGGCTCTAGTAAGGCCCTATGGTCAAGTAATTGTAATGTCGATGAAGCAGATGACTGTATTAATGCATTTGTGGAATCTGATGACATGCTTTCTTCTTGGAGGCGAAAGAGTAGTGATTCTTCGCCTGTTAAAAGTTCTAGGGATGAGAATAATGCTATTGTGTTAAGATCTAGAAACTCTTCTCCAACTACAGTCTCGAATTATGGGTATACTGATGGAGAGCATGTCAAGCTAGAAAAGGAGGAAAAAGTTAGCATTGTTAGGGAAGATGATCTAGGTGCATCACTAGATGATGAAGAGGCAGCTGCTGTGCAAGAGCAAGTAAGGCAGATAAAGGCTCAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGTTTTGAGGAGGACAAGAATTTCCATGTTGTATTAAATTCTGTAATAGCTGGGCGCTATCATGTCACTGAGTATCTGGGATCTGCTGCATTTAGCAAAGCCATACAAGCTCATGACCTGCACACAGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAGGACTTTTTTGACCAAAGCCTTGATGAGATCAAGCTTCTTAAGTATGTCAATAAGCATGATCCTGGAGACAAGTACCACCTTCTAAGGTTGTATGATTACTTCTACTACAGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCCAACTTATATGAGTTTCATAAATTTAATCGAGAATCAGGGGGGGAAGTGTATTTCACAATGCCAAGATTGCAGTCAATCACCATTCAATGTTTGGAAGCACTTCAGTTTCTGCATAGCCTTGGACTGATACATTGTGACTTGAAGCCAGAGAATATATTGGTTAAAAGCTATAGCAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACGGATCACCTTTGCTCGTATGTTCAGTCCAGGTCTTATCGTGCTCCTGAGGTTATTTTGGGGCTTTCATATGACAAGAAGATTGATATCTGGTCACTTGGATGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTCTTCCATAATGATTCACCTGCAACATTACTTGCTCGGGTGATTGGGATCATTGGCCCAGTTGATCAAAGTTTACTAGCTAAAGGACGAGATACATATAAGTACTTCACAAAAAATCATATGCTGTATGAACGGAATCAGGAAAGCAACCGGTTAGAATATCTGATTCCGAAAAAGACATCCTTGAGGCATAGGTTACCAATGGGGGACCAAGGTTTCATCGATTTTGTTGCTCATTTGCTTGAGGTTAACCCGAAGAAGCGGCCTTCTGCATCCGAGGCCCTGAAGCACCCATGGTTATCATACCCTTATGAACCAATATCATCTTGA 3540 0.4158 MADTNSVEVILDFLRRNRFTRAEAALRSELSNCSDVNGFLQKLTLEEKDLRGVLQNDKGKPVVENQGSDSLDGVEVSKELIVKEIECRTGKNAAESKWKTVAPTVERNKSNEVVGTSDKNFTFSKSSEDSVLDLYSWKYNLSNGPSEPCQNDVGSRPNNALKAPISQQPKYQTSEAPDATNSNVKSREENNVPAERSTSWLGNSGKASTEPKYDLMQSKDPRELDRQLKFNVSSLKENLTDNVLSRTDENVSSSTDLWKDCTVKTVFPFSMGDMSTSYNGSTYSDRKEEKRKAEKSDVRASIKEEVDEVGRALYLGKLQGSSGGLSFPLAPENQKEEFPRLPPVKIKSEDKPLTFNWGDKFECDGLAVKLPGADNTLLIGSYLDVPIGQDIKTTGARKAMGGSWLSVSQGIAEDTCDLVSGFATVGDGLSESVDYPNEYWDSDEYEDDEDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTAHGSVPDPQERGPAKDEEDDQSFAEEDSYFSGEQYIISKNVEPVTASGDPIGLTITEMYGRTNGNDGMAQYDRQMMDVEELNLMHMEPVRQGFATHKNDLSMLGDGKVLNHVARSRIEDMEDDQHGSVRSIGVGINSDAADIGSEVHGSLVGGSSEGDLDYFRDHDTLHSGSKHSSHHDLDKSSINKSFKNNKKNDKTESNKYIIDGDKDGCSQVKSHTDGNFSFPQSLRDGHMIQAGSSKALWSSNCNVDEADDCINAFVESDDMLSSWRRKSSDSSPVKSSRDENNAIVLRSRNSSPTTVSNYGYTDGEHVKLEKEEKVSIVREDDLGASLDDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFHNDSPATLLARVIGIIGPVDQSLLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00355 1179 Gene3D Transferase(Phosphotransferase) domain 1 922 1170 - -
Cca08g00355 1179 SMART serkin_6 868 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00355 1179 MobiDBLite consensus disorder prediction 144 206 - -
Cca08g00355 1179 CDD PKc_DYRK_like 868 1170 - -
Cca08g00355 1179 PANTHER - 2 1177 - -
Cca08g00355 1179 Gene3D Phosphorylase Kinase; domain 1 862 949 - -
Cca08g00355 1179 Pfam Protein kinase domain 868 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00355 1179 Coils Coil 820 840 - -
Cca08g00355 1179 SUPERFAMILY Protein kinase-like (PK-like) 857 1172 IPR011009 -
Cca08g00355 1179 MobiDBLite consensus disorder prediction 641 684 - -
Cca08g00355 1179 MobiDBLite consensus disorder prediction 144 220 - -
Cca08g00355 1179 ProSiteProfiles Protein kinase domain profile. 868 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00355 1179 MobiDBLite consensus disorder prediction 277 296 - -
Cca08g00355 1179 MobiDBLite consensus disorder prediction 474 504 - -
Cca08g00355 1179 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1177 - -
Cca08g00355 1179 ProSitePatterns Serine/Threonine protein kinases active-site signature. 994 1006 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00355 Cca-Chr8 5344079 5352616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00355 867 1165 MAP Kinase Gene Family AT5G19010 31.034 1.18e-29 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Cca08g00355 Pkinase 2.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00355 - - gmx:100798608 2157.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02859 09 54216804 54226434 Cca08g00355 08 5344079 5352616 PCT