Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00317 ATGCCAATCTTGTACAAGTTCATCATTTGGATCATCACCGACCCTTCAAATATCAAGTTCTATGTAACTCATGCTTCCTTCACACAATTCAACCTTACAACCAACAACACTTTATACTACAACTTAAAGGTCAACATCACAGTGAGAAGCCCCAACAAACACACCATAGTGCACTATAAGGAGATCAAAGCAAAAGCATGGTACAAAGACAATGGTTTTGGTAAGGTAAACCTAACACCCTTTGATCAAGGCCACAACAACACAACCTTCCCTAAAGTAGTGTTTGAAGGGCATAATGTGATAAGGCTCAAACCTAAACAACTAGGTGAGTACAAAGAGGAGACAAGTGCTAGAGTTTATGATGACTTGGCTGTGGGTTTGGATCTTACAATCACAACCAAGATTGTTGGAATCGACAGCACTAATTGGAAGCCAATGTATGTTCGGTGTCTCCCCTTAAGGGTTCCTTTGATTTCCAAAGGTAGAACAACACATCCTTTTAATGTCAGCAAATGTACTAACTTCTTCAAGTGA 534 0.397 MPILYKFIIWIITDPSNIKFYVTHASFTQFNLTTNNTLYYNLKVNITVRSPNKHTIVHYKEIKAKAWYKDNGFGKVNLTPFDQGHNNTTFPKVVFEGHNVIRLKPKQLGEYKEETSARVYDDLAVGLDLTITTKIVGIDSTNWKPMYVRCLPLRVPLISKGRTTHPFNVSKCTNFFK 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00317 177 PANTHER OS05G0367900 PROTEIN 2 174 IPR044839 GO:0098542
Cca08g00317 177 PANTHER HARPIN-INDUCED 1 2 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00317 Cca-Chr8 4672331 4672864 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00317 17 157 SNARE and Associated Proteins AT1G32270 29.371 1.25e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00317 - - ccaj:109803324 288.5