Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00314 ATGGTCTTCAAGGGAAGGTTCTTCTCTTCCAAGAAATCCGATTCTTCAAGCCCCGATGCTTCCTCCAACAACAGCCCCCGATCCTTCTCCTCCAACTCCCCCTCCAGATCCGACAAGAAGAAGCCCAAATCCGCCGCCAACCAAACCCTAAccgccgccgccgcctgccgccAGACGCAGGTCAAGGACGCCGCCAAGAAGAAGGATGCCGCCGTCAAGGGGAAGGAGACTCAAACCGGATTATTCTCCGCCGCCAGGGATTCTCCGGGGAAGAAGCTGAcggcggcggcgacggcgtcggaggGGAGGGAATCGCCGTCGTCTTCGTCGGTTTCGCCGATTCTCGCCTCCTCGCTGGGGCTGAACAGGATCAAGACGAGATCGGGGCCGTTGCCACAGGAGAGCTTCTTCGGGTTCAGGGGCGAGAAGGGGAcggcggcggcgctcggcggcagcaacctctcgcgccccggcggcggccgtggcggcgacggGAAGAAGAAGGAGCTGGCTAGCCAGAGCAGGGTTGGGTTTCGCGAGAGCTCCGGCGCCGGATGGGGCGACAACGGGAGCAATTCCGATAGCATGTCAACGTCGGGGAGCGTGCCATCGAGGGAGCAGAGTCCGGTCGTGTTGCCGCGGTCGCGGTTGCAGAACGGAGAATCATCTGCGGAAGCTACAGGCAAACAGGCACCGACATGGGCTCAGTCTGGAGGCTTAAGAAGTGCAGATGTTTGTACTCCCGAGACAGCATATGATTTTGAAAACCCAAAGGAGTCTGAATCTCCTCGTTTTCAAGCTATATTGAGAGTCACTAGCGCACCCAGAAAGAGGTTTCCGTCGGATATCAAAAGTTTTTCCCACGAGTTGAATTCGAAGGGTGTCTGGCCTTTTCCATTTCTGAAGCCTCGACGGTTAAATAACCTTGAGGAGATTTTGGTGGTTATTAGGGCAAAATTTGATAAAGCAAAGGAAGACGTGAACTCTGATCTTGCTATTTTTGCAGCTGACCTGGTTGGAATTCTTGAAAAAAATGCTGATACGCATCCCGAATGGCAAGAGACAATTGAGGACTTGCTAGTTCTGGCCAGGAGCTGTGCTATGACTTCATCTGGGGACTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGAGTTGGATGATAGGCGTCAAGAGCATCCCCCTGGGATGCTAAAGCAGCTCCACACTCGAATGCTTTTTATTCTCACAAGGTGTACTCGATTATTGCAATTCCACAAGGAAAGTGGTTTGGCTGAGGATGAACCTGTTTTCAATCTTCGTCAATCCAGAGTCTTGCATTCTGCTGGAAAATGTATTCCTCCTGGTGTGGGAAGGGATACTAAAAGTTCAAGTGCTGCAAAGGCCTTAAAGCCTTCATCCAAAAAAGCTTTTAGTCAAGAGCAGAGTATGATGGGTTGGAAGAAAGATGTTGTGCAACCTGAAAATCTATCACTTCCGGTTGATGATGACAATGCAAAACACTTTGACTCTTCTTTGGGCAGGGATCGAATGGCTTCTTGGAAGAAATTTCCATCTCCATCGGGAAGAAGCCCTAAAGAACCTGGTCAGTTGAAGGACCAAAATTATGGGAGGGTTGAATCTTCAAAGGCATCAAATAATAAGAGATTCACTTCTGATGTGGATCTCTCTACTGCTAAGCCATCTGAGCTTCTTCCTGTCAAAGATTCCTTGGATCATGCTTCCAAACACCAGCACAAGGTTTCCTGGGGATACTGGGGAGATCAGCAGAATAATAGTGAGGATAATTCAATAATTTGTCGTATATGTGAAGAGGAAGTTCCAACTTCACATGTTGAAGATCATTCAAGGATTTGTGCAGTTGCTGATAGATGTGATCAGAAGGGACTGAGTGTCAATGAGCGTCTTGTCAGAATTGCTGACACATTAGAAAAGATGATGGAATCATGTACACAAAAGGATACCCAACAAATGGTGGGAAGTCCTGATGTTGCAAAAGTGTCAAATTCTAGTATGACTGAAGAATCTGATGTTCCTTCCCCTAAACTTAGTGATTGGTCTCGCAGAGGCTCAGAAGACATGCTAGACTGTTTCCCTGAAACCGACAATTCTGTTTTTATGGATGACCTAAAAGGATTACCACTTATATCATGTAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCTAGGTCTCCTTTGATGACACCAAGGACAAGTCAGATTGACTTGCTCTTGGCAGGGAAGGGTGCTTATTCCGAACATGATGATCTACCGCAGATGAATGAACTTGCTGATATAGCACGATGTGTGGCAAATGCACCTCTGGATGATGATCGCACAACGTCATATTTATTATCTTGTCTTGATGATTTGCGGGTTGTTGTAGAACGAAGGAAATTTGATGCTCTTACTGTGGCGACCTTTGGAACACGTATTGAGAAGCTGATACGAGAGAAGTATCTGCAGCTCACTGAGATGGTGGATGTTGAAAAGATAGATACAGAGAGCACTGTTGATGATGATGTTCTCTTGGAAGATGATGTGGTTCGCAGCTTGAGAACAAGCCCAATCCATTCTTCAAGGGATCGTACCTCTATTGATGACTTTGAGATTATAAAACCTATCAGTCGCGGGGCATTTGGAAGGGTTTTCTTGGCTAAAAAGAGAACAACTGGTGATCTTTTTGCAATAAAGGTTCTCAAGAAGGCAGATATGATCCGTAAGAATGCTGTGGAAAGTATATTAGCAGAACGAGATATCTTAATTACAGTACGCAACCCTTTTGTGGTTCGTTTCTTCTATTCTTTCACATGTCGAGAGAACTTGTATCTCGTCATGGAGTATCTGAATGGAGGTGACCTGTATTCATTATTAAGGAATTTGGGTTGCCTAGATGAGGAAGTTGCCCGTGTATATATTGCTGAAGTGGTGCTTGCGTTGGAGTATTTGCATTCACTGCGTGTGGTTCATCGTGACTTGAAGCCTGACAATTTATTGATAGCACATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCTAAAGTTGGTCTCATCAACAGTACGGATGATTTGTCTGGTCCAGCAGTGAATGGGACATCCCTACTTGGAGAAGATGAAACTGATGTATTTACATCCGAGGATCAAAGGGAAAGGAGGAAGAAACGTTCTGCAGTGGGCACGCCTGATTACTTAGCCCCAGAGATACTTTTGGGAACTGGACATGGGTATACTGCTGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGCAGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGCAGTTCCTGAAGAGATGAGTCCTGAAGCACATGATCTTATTGATCGATTATTGACAGAAGACCCTAATCAAAGACTAGGATCCAATGGGGCGTCAGAGGTAAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAAGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGATACCAGTTACTTTACTAGTCGTTATTCGTGGAATACTTCTGATGGCCTTGTATATCCAGCAAGTGATGATGAGGATTCTAGTGATGCTGATAGCTTAAGTGGCAGCAGTAGTTGCTTGAGTAATCGCCAAGATGAAGTGGGAGATGAATGTGGGGGTCTTGCTGAGTTTGATTCTGGCACATCTGTTAATTACTCTTTTAGTAATTTCTCCTTTAAGAATCTCTCCCAGCTTGCATCAATCAACTATGATCTCACCAAGGGATGGAAAGATGACCCGCCAACGAATTCCAGTGCATAG 3873 0.4402 MVFKGRFFSSKKSDSSSPDASSNNSPRSFSSNSPSRSDKKKPKSAANQTLTAAAACRQTQVKDAAKKKDAAVKGKETQTGLFSAARDSPGKKLTAAATASEGRESPSSSSVSPILASSLGLNRIKTRSGPLPQESFFGFRGEKGTAAALGGSNLSRPGGGRGGDGKKKELASQSRVGFRESSGAGWGDNGSNSDSMSTSGSVPSREQSPVVLPRSRLQNGESSAEATGKQAPTWAQSGGLRSADVCTPETAYDFENPKESESPRFQAILRVTSAPRKRFPSDIKSFSHELNSKGVWPFPFLKPRRLNNLEEILVVIRAKFDKAKEDVNSDLAIFAADLVGILEKNADTHPEWQETIEDLLVLARSCAMTSSGDFWLQCESIVQELDDRRQEHPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEPVFNLRQSRVLHSAGKCIPPGVGRDTKSSSAAKALKPSSKKAFSQEQSMMGWKKDVVQPENLSLPVDDDNAKHFDSSLGRDRMASWKKFPSPSGRSPKEPGQLKDQNYGRVESSKASNNKRFTSDVDLSTAKPSELLPVKDSLDHASKHQHKVSWGYWGDQQNNSEDNSIICRICEEEVPTSHVEDHSRICAVADRCDQKGLSVNERLVRIADTLEKMMESCTQKDTQQMVGSPDVAKVSNSSMTEESDVPSPKLSDWSRRGSEDMLDCFPETDNSVFMDDLKGLPLISCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDLPQMNELADIARCVANAPLDDDRTTSYLLSCLDDLRVVVERRKFDALTVATFGTRIEKLIREKYLQLTEMVDVEKIDTESTVDDDVLLEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVNGTSLLGEDETDVFTSEDQRERRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPAVPEEMSPEAHDLIDRLLTEDPNQRLGSNGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPASDDEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSGTSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPPTNSSA 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00314 1290 ProSiteProfiles Protein kinase domain profile. 879 1168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00314 1290 ProSiteProfiles AGC-kinase C-terminal domain profile. 1169 1273 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cca08g00314 1290 SUPERFAMILY Protein kinase-like (PK-like) 876 1206 IPR011009 -
Cca08g00314 1290 ProSitePatterns Serine/Threonine protein kinases active-site signature. 998 1010 IPR008271 GO:0004672|GO:0006468
Cca08g00314 1290 SMART serkin_6 879 1168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00314 1290 Coils Coil 306 326 - -
Cca08g00314 1290 Gene3D Transferase(Phosphotransferase) domain 1 963 1186 - -
Cca08g00314 1290 MobiDBLite consensus disorder prediction 490 554 - -
Cca08g00314 1290 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 27 1288 - -
Cca08g00314 1290 MobiDBLite consensus disorder prediction 100 124 - -
Cca08g00314 1290 MobiDBLite consensus disorder prediction 723 745 - -
Cca08g00314 1290 MobiDBLite consensus disorder prediction 650 679 - -
Cca08g00314 1290 MobiDBLite consensus disorder prediction 534 554 - -
Cca08g00314 1290 Gene3D Phosphorylase Kinase; domain 1 877 1197 - -
Cca08g00314 1290 MobiDBLite consensus disorder prediction 1 241 - -
Cca08g00314 1290 Pfam Protein kinase domain 879 1168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00314 1290 MobiDBLite consensus disorder prediction 1211 1236 - -
Cca08g00314 1290 MobiDBLite consensus disorder prediction 458 473 - -
Cca08g00314 1290 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 1288 - -
Cca08g00314 1290 MobiDBLite consensus disorder prediction 175 237 - -
Cca08g00314 1290 MobiDBLite consensus disorder prediction 9 33 - -
Cca08g00314 1290 MobiDBLite consensus disorder prediction 493 509 - -
Cca08g00314 1290 MobiDBLite consensus disorder prediction 443 478 - -
Cca08g00314 1290 MobiDBLite consensus disorder prediction 650 688 - -
Cca08g00314 1290 CDD STKc_MAST_like 885 1173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00314 Cca-Chr8 4628826 4642813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00314 52 1284 AGC Kinase Gene Family AT3G17850 66.825 0.0 1621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Cca08g00314 Pkinase 1.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00314 - - gmx:100776995 2213.34