Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00281 ATGTTCAAACCCAGAAATTTCATTGGGTTGCATAAGCAAGTGATGGAGCCTAAGACTAACTTTGTGTTTCCACTTCCATTCGTGTTCTTCATTACTCACTGGTTTCTATTGGCTCTTCATGGAACTGCTGAGAGTTCCACTTCCACGTATATAGTCCACATGGACAAATCCCTCTTTCCCAATGTCTTCACAACCCATCATGAATGGTTTCAATCCACCATTGATTCCATAAATTGTTGCatgtgtACTCTTTCTAGTGGCCTATGGCATGCCTCAAATTTTGGGGAGGATGTCATCGTGGGTGTCATTGACTCAGGTGTGTCGCCTGAGAGTGAAAGCTTTAAAGATTATGGCATGACCAAGAAAATTCCAAACAAATGGAAAGGGATATGTGAGGAACGGCAAGATTTCTTCAACTCTTCCATGTGCAACTTCAAGCTGATTGGAGCTAAATATTTCAACAAGGGTTTGATTGCTTAA 480 0.4083 MFKPRNFIGLHKQVMEPKTNFVFPLPFVFFITHWFLLALHGTAESSTSTYIVHMDKSLFPNVFTTHHEWFQSTIDSINCCMCTLSSGLWHASNFGEDVIVGVIDSGVSPESESFKDYGMTKKIPNKWKGICEERQDFFNSSMCNFKLIGAKYFNKGLIA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00281 159 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 82 159 IPR045051 -
Cca08g00281 159 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 75 IPR045051 -
Cca08g00281 159 Gene3D Peptidase S8/S53 domain 97 156 IPR036852 GO:0004252|GO:0006508
Cca08g00281 159 SUPERFAMILY Subtilisin-like 21 132 IPR036852 GO:0004252|GO:0006508
Cca08g00281 159 PANTHER SUBTILISIN-LIKE PROTEASE 82 159 - -
Cca08g00281 159 PANTHER SUBTILISIN-LIKE PROTEASE 35 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00281 Cca-Chr8 4056620 4057535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00281 42 159 Subtilisin-like Serine Gene Family AT5G67090 34.884 7.40e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00281 - - pvu:PHAVU_008G057000g 135.961