Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00277 ATGCACGCCAAGACAGACTCCGAGGTAACAAGCCTGGCGGCGTCGTCCCCCACGCGCTCCCCTCCGCGGCGGCCTCTCTACTACGTGCAGAGCCCCTCCAGGGACTCCCACGACGGCGAGAAGACCGCCACGACGTCGTTTCACTCCACGCCCGTTCTCAGCCCCGTGGGTTCTCCCCCGCACTCTCGCCACTCCTCCTCCACGCGCTTCTCCTCCAAGAAGGACCACACTCACAACACCCTCAAGCCCTGGAAGCGAATCGACGTCATCGAAGAAGAAGGCCTTCTCCAAGGGGATGATCGCCGCCACTCCCTCCCTCGCCGCTGTTACTTTCTCGCcttccttcttggctttctgcttctcttctccctcttctctCTTATCCTCTGGGGGGCTAGTAGACCCATGAAACCCAAGATCTCCATCAAGAGCATAAAGTTCGATCACGTAAGGGTCCAAGCTGGTTCGGATTCAACAGGGGTGGCCACTGATATGATCACAATGAATTCCACGTTGAAATTCACATACCGCAACACGGGCACATTTTTCGGGGTCCATGTCACCGCCACACCCGTGGAACTTTCCTACTCAGAGATCGTAATTGCTTCGGGAAACGTAAGATTCAATATCAACATCACAAACAAACATGTTTGA 654 0.5275 MHAKTDSEVTSLAASSPTRSPPRRPLYYVQSPSRDSHDGEKTATTSFHSTPVLSPVGSPPHSRHSSSTRFSSKKDHTHNTLKPWKRIDVIEEEGLLQGDDRRHSLPRRCYFLAFLLGFLLLFSLFSLILWGASRPMKPKISIKSIKFDHVRVQAGSDSTGVATDMITMNSTLKFTYRNTGTFFGVHVTATPVELSYSEIVIASGNVRFNINITNKHV 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00277 217 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 54 207 - -
Cca08g00277 217 MobiDBLite consensus disorder prediction 43 66 - -
Cca08g00277 217 MobiDBLite consensus disorder prediction 1 78 - -
Cca08g00277 217 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 54 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00277 Cca-Chr8 3917620 3920057 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00277 - - gmx:100817451 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00277 08 3917620 3920057 Cca08g00277 08 3917620 3920057 ECH
Cca09g02749 09 53184446 53186583 Cca08g00277 08 3917620 3920057 PCT