Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00219 ATGGGAAAAGCGAGGGACAGAACCGAGGATTTCAAAGACGCCGTGCGCCACACCGCACGCTCTTTCGGCTACGACGAGGCTAAATTGGCGTCCATTTTGGCATCCTTCATTATTCATAAACCGCCACAAAGATCCCCATTTTCCAAAGCTGCATTGAAGACGCTGGAGAGTATTGGAGAGCTGGATCAGTTTTTGTTGAAGCATAGGAAGGACTACACGGATCTTCATCGCACCACTGAGAAGGAGAGAGATAGCATCGAGCATGAAGTTAGTACTTTTATTAAAACTTGCCAGGAACAAATTGATATTCTTAAGAATAGCATAAATCAAGATGAGGAAACTTCAAAAGGTTGGCTTGGCATTTCAAACACTAAATCTAATGCAGACACCATTGCCCACAAACATGGGGTGGTTCTAATTTTAAGCGAGAGACTCCATTCAGTTACAGCACAGTTTGATCAGCTCAGAGCTGTACGCTTCCAGGATGCTATTAATAAAGCAATACCACGACGAAAACTTAATCGTGTAACCAGGAAAGATTCTGCAGAAACCTCTAATTCAGGAGACACAGAGCTCAGAGAACCAGAGGAGTTACAAGCTGAGCCTCTAAGACTCCAACAACAACACTTAGATGATGAAACGCGTGCCCTTCAGGTGGAATTGACTAGTCTTCTCGATACAGTTCAAGAAACTGAAACTAAGATGGTGGAAATGTCTGCACTAAATCATCTCATGTCTACACATGTTTTGCATCAAGCGCAGCAGATTGAGCACCTGTATGAGCAGGCTGTGGAAGCTACTAAGAATGTTGAGCTTGGTAACAGAGAACTCTCTCAAGCCATTCAGCGGAATAGCAGCAGCAGGACATTTCTTTTACTGTTTCTGTTTGTGCTTACTTTCTCGATCCTCTTTCTTGATTGGTATAGTTAA 930 0.4323 MGKARDRTEDFKDAVRHTARSFGYDEAKLASILASFIIHKPPQRSPFSKAALKTLESIGELDQFLLKHRKDYTDLHRTTEKERDSIEHEVSTFIKTCQEQIDILKNSINQDEETSKGWLGISNTKSNADTIAHKHGVVLILSERLHSVTAQFDQLRAVRFQDAINKAIPRRKLNRVTRKDSAETSNSGDTELREPEELQAEPLRLQQQHLDDETRALQVELTSLLDTVQETETKMVEMSALNHLMSTHVLHQAQQIEHLYEQAVEATKNVELGNRELSQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00219 309 PANTHER SYNTAXIN-18 5 309 - -
Cca08g00219 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Cca08g00219 309 PANTHER SYNTAXIN-18 5 309 - -
Cca08g00219 309 Coils Coil 94 114 - -
Cca08g00219 309 Gene3D - 211 306 - -
Cca08g00219 309 SUPERFAMILY t-snare proteins 57 273 IPR010989 GO:0016020|GO:0016192
Cca08g00219 309 MobiDBLite consensus disorder prediction 174 198 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00219 65 309 SNARE and Associated Proteins AT1G51740 71.951 5.38e-112 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00219 K08492 - gmx:100778011 563.918