Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00207 ATGTTCCCTCTAACACTAGCGATTCTCATAGCCCCCCTTGTCACATTGATATACATTCTATGCACCAGCGTGTCACGGCCAAAAGAGCCACCGCGTCCACCGGGGCCACCACGGCTACCGATAATCGGGAACCTCCACAACATGGTAGGAGGAAGCGGAACACTCCCACATCGTTCCCTGCAATCCCTGGCCAAACGTTACGGTCCCATAATGTCCCTCCAACTAGGAAATGTTCCAACGGTCGTGGTCTCGTCCCCGGAGGCCGCGGAACTGTTCCTGAAGGCCCACGACGTAGTGTTCGCGAACAGGCCCAAGTTGGAGGCGGCCCAATACACGTACGGCCCGGAGAGCGTGGCGTTCGCGGAGTACGGCGCGTACTGGCGAAGCGTGAGGAGAGTGTGCACCACGCACCTGCTGAGCGCGTCGAAGGTGGAGTCGTTCGCAGGTTTGAGGAGGCGGGAAGTGGAGGCGATGGTGCGGCGCGTGAGGGAGGCGCGTGAGGTTGTGGACGTGAGCGAGAAGGTGGGGGAAGTGTTGGAGGATATGGCATGCATGATGGTGTTGGGACGGAACAAAGATGATAGGTTTGATTTGAAGGGTATTCTTGTTGAGACCATGACTGTTTCCGGTGCTTTCAATTTCGCAGATTATTTGCCTTGGCTTCGACCCTTTGATCTTCAGGGATTAACACGACGCTCGAAGAAAATAAGTGAAGCACTAGATAAGATGTTAGATACAATGATAGAGGAGCATCAACTATCTCCTACGACACAAGGGCACCACAAGGATTTCATTCACACGTTACTTTCCTTAAAGGACCAACCAATTCATCCCCACGATGAACATGCACATATAATTAACAAAAGGAGCATCAAGGGTATTGTGTTTGACATGATAATAGGTGCATCAGAAACATCAAGCAATGTGATTGAATGGGCCATTTCAGAACTTGTGAGGCATCCAAGAGTGATGGAAAATCTTCAAAATGAGCTAAAAAATGTGGTTGGAATAAACACCATGGTGGATGAAACCGATTTAACAAAATTAAGTTATTTGGATATGGTTGTGAAGGAGACCCTAAGATTACACCCCGTTGTGCCTCTTCTAGCCCCTCATGAATCCATGGAAGATATAGTGATTGAAGGTTACCACATTAAGAAGAAGTCACGAATTATAATAAATGCATGGGCTATAGGGAGAGACCCTAAAGCATGGTCTGAAAATGCAGAAATGTTTTACCCAGAAAGATTTTTAAACTCTAATATAGATTTTAAGGGACAAGACTTTCAACTTATACCATTTGGGTCTGGTCGTAGAAGTTGTCCAGGAATTGTAATGGGCTTGACCATAGTTAAGTTGATTTTGGCTCAATTGGTACACTGCTTCAATTGGGAACTACCTTATGGCATGAGTCATGATGAATTGGATATGAATGAAAAATTTGGGCTATCAATGCCAAGAGCAAACCATTTGCTTCTGATACCAACTTATCGTCAACTAAATGAAACGTTGGTTAATTGA 1521 0.4642 MFPLTLAILIAPLVTLIYILCTSVSRPKEPPRPPGPPRLPIIGNLHNMVGGSGTLPHRSLQSLAKRYGPIMSLQLGNVPTVVVSSPEAAELFLKAHDVVFANRPKLEAAQYTYGPESVAFAEYGAYWRSVRRVCTTHLLSASKVESFAGLRRREVEAMVRRVREAREVVDVSEKVGEVLEDMACMMVLGRNKDDRFDLKGILVETMTVSGAFNFADYLPWLRPFDLQGLTRRSKKISEALDKMLDTMIEEHQLSPTTQGHHKDFIHTLLSLKDQPIHPHDEHAHIINKRSIKGIVFDMIIGASETSSNVIEWAISELVRHPRVMENLQNELKNVVGINTMVDETDLTKLSYLDMVVKETLRLHPVVPLLAPHESMEDIVIEGYHIKKKSRIIINAWAIGRDPKAWSENAEMFYPERFLNSNIDFKGQDFQLIPFGSGRRSCPGIVMGLTIVKLILAQLVHCFNWELPYGMSHDELDMNEKFGLSMPRANHLLLIPTYRQLNETLVN 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00207 506 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 17 500 - -
Cca08g00207 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Cca08g00207 506 PANTHER CYTOCHROME P450 FAMILY PROTEIN 17 500 - -
Cca08g00207 506 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00207 506 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00207 506 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00207 506 Gene3D Cytochrome P450 19 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00207 506 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00207 506 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00207 506 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00207 506 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00207 506 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00207 506 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00207 506 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00207 506 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00207 506 SUPERFAMILY Cytochrome P450 33 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00207 506 Pfam Cytochrome P450 33 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00207 Cca-Chr8 2889682 2892436 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00207 26 503 Cytochrome P450 AT3G48310 38.046 1.84e-120 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00207 - - gmx:100798918 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00207 08 2889682 2892436 Cca08g00207 08 2889682 2892436 ECH
Cca08g00207 08 2889682 2892436 Cca09g02695 09 52596886 52599786 PCT