Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00206 ATGTTACCTCAAATATTAGCCATCCCTACAATACTAGTAGTGATATTCATATTCATTCTATCTGCTGCTGTGTTACTATCAAAGCAACGCCAAGGTAATGGAAAACATCCACCTGGTCCCAAGACCCTACCAATTATTGGTAACCTCCACATGCTAGGGAAACTACCACATCGCACCCTTCAATCCCTTGCCACAAAATATGGACCTATAATGTCCTTAAAGCTAGGACAGGTTCCAGCCATAGTGATTACTTCCCCTGAAACTGCTGAACTATTCCTCAAAACCCATGACATTGCTTTTGCTAGCAGGCCTAAATCCATCTCATCCAAATACATTTCTTATGGTGGCAAGGGCTTGGTGTTTTCTGAGTATGGTACCTACTGGCGCAACATGAGGAAACTCTGCACCTTACAACTCCTTGTTGCATCAAAAGTTGAAATATTTTCTCCCTTGAGGAGTGAGCACTTGGGAGAGTTTGTTAAGTCTCTCCAAAAAAGAGCTTCATCAAGTGAGGTTGTGGACCTTAGTGACATGGTGGCGGATCTCATTGAGAATATCACCTTTAAAATGATATTGGGCCATAGTAAGGATGATAGATTCGATGTAAAGAATCTTGTTCGTGAAGTATTGATCTTGATAGGAACTTTCAATGTTTCAGATTATGTGCCCTGGGTTGGTGTGTTTGATCTTCAGGGATTAGTAAGACGAATGAAAAAAGTAAGTAAAGAATTTGACGAAATGATGGAGCTGATTATCAAAGAGCATGAACAATCTTCTGATAACGACCAGAATGGCCAACGCCAGAAGGACTTTTTGGACATATTCCTAGCACTCATGCATCAACCCATTGATCCTCAAGACCAACAGGGTCCTGTCATTGATAAAACAAATATCAAGGCTATTTTGATGACTATGATCATCGCGGCAACTGACACATCTGCTACAACAGTTGAATGGGCCATGTCAGAACTCCTAAAGTATCCAAGGGTGATGAAGAAACTCCAAGAGGAGTTGGAAAGTGCAGTGGGGATGAATAGAAAGGTGGAGGAGAGTGACATGGAAAACTTGCCTTACTTGGATTTAGTGGTGAAGGAGACACTAAGATTGCACCCGGTTACACCTTTGTTATTGCCTCGTGAGTGTCGAGAAGATGTTACTGTTGATGGTTATTGCATAAAGAAAAAGTCAAGGATCATTGTAAATGCATGGGCAATAGGAAGAGATCCTAAAGTTTGGTCAGATAATGTTGAAGTGTTTTATCCAGAGAGATTTGTAAATAACAACATAGATATTAGAGGACATGACTTTCAACTTATACCGTTTGGCTCTGGTCGCAGAGGGTGCCCAGGGATTCATTTGGGTCTTACTACTGTTAAGATTGTTCTGGCTCAATTGGTTCACTGCTTCCATTGGGAGCTTCCATTTGGCATGTCCCCTGATGACTTGGACATGAGTGAGAAGTTTGGTCTCACAATGCCAAGAAGTAAGCACTTGCTAGGTGTGCCATCTTATCGGTTAGCTGGTGAAGTTGGAAAAAAATAG 1542 0.415 MLPQILAIPTILVVIFIFILSAAVLLSKQRQGNGKHPPGPKTLPIIGNLHMLGKLPHRTLQSLATKYGPIMSLKLGQVPAIVITSPETAELFLKTHDIAFASRPKSISSKYISYGGKGLVFSEYGTYWRNMRKLCTLQLLVASKVEIFSPLRSEHLGEFVKSLQKRASSSEVVDLSDMVADLIENITFKMILGHSKDDRFDVKNLVREVLILIGTFNVSDYVPWVGVFDLQGLVRRMKKVSKEFDEMMELIIKEHEQSSDNDQNGQRQKDFLDIFLALMHQPIDPQDQQGPVIDKTNIKAILMTMIIAATDTSATTVEWAMSELLKYPRVMKKLQEELESAVGMNRKVEESDMENLPYLDLVVKETLRLHPVTPLLLPRECREDVTVDGYCIKKKSRIIVNAWAIGRDPKVWSDNVEVFYPERFVNNNIDIRGHDFQLIPFGSGRRGCPGIHLGLTTVKIVLAQLVHCFHWELPFGMSPDDLDMSEKFGLTMPRSKHLLGVPSYRLAGEVGKK 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00206 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 507 - -
Cca08g00206 513 SUPERFAMILY Cytochrome P450 37 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00206 513 Gene3D Cytochrome P450 23 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00206 513 Coils Coil 331 351 - -
Cca08g00206 513 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00206 513 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00206 513 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00206 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Cca08g00206 513 Pfam Cytochrome P450 37 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00206 513 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 507 - -
Cca08g00206 513 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00206 513 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00206 513 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00206 513 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00206 513 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00206 513 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00206 513 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00206 Cca-Chr8 2882563 2887267 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00206 10 510 Cytochrome P450 AT5G07990 41.797 9.83e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00206 - - gmx:100798918 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00206 08 2882563 2887267 Cca08g00206 08 2882563 2887267 ECH