Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00204 ATGTTAGTTGAAACATTAGCTATCCCTGCAGCACTTCTAGTGATATTCATTTTGATTCTATCTTCTGCCTTGTTGCATCCAAACCAAGTTGAAGATGATAGGAGACATCCACCAGGTCCTAAGGCCCTCCCAATTATTGGTAACCTTCACATGTTAGGAAAACTCCCACATCGCAGCCTTCAGACACTTGCCAAAAAATATGGACCCATAATGTCCATCAAGTTAGGACAAGTCTCAACCATTGTGGTTTCCTCCCCAGAAGCTGCTGAGCTATTTCTCAAGACTCACGACACTGTTTTTGCTAGTAGGCCCAAAACTCAAGCATCGGAATACATGTCTTATGGCAGTAAGGGCATGGTGTTTTCTGAGTATGGTCCTTATTGGCGCAATGTCAAAAAGTTGTGCACCACACAACTTCTAAGTGCATCAAAAGTGGAGATGTTTGCTCCATTGAGGAGGGAGGAGTTAGGACTATTTGTAAAGTCACTTGAAAAAGCAGCAGCCTCACGTGATGTTGTGAATGTCAGCGAGCAAGTTGGGGAACTGATATCAAATATTGTCTACAAAATGATACTTGGCAGCAATAACGACGATAGATTCGACCTAAAGGGGCTTACTCAGGAGGTTTTGCACTTGTGTGGTGTGTTCAATATGGCAGATTATATACCTTGGGCTGACTTCTTTGATCTTCAGGGCCTAAAAGGAAAATTCATGAAAACAATAAAGGCATTTGATCAAGTGTTCGAGCAAATCATCAAAGACCATGAGTATCCTTTTGGCAGCAACAAAAAAAGTGTATACTCCGAGGACTTTGTAGACATACTACTATCATTTATGCACCAACCCATGAATAAACATGAACAGAAGCATGTTATCGATAGAACAAATATCAAGGCTATTATTTTAGATATGATAGCAGGAGCATTTGACACATCTGCTGTTGTAATTGAGTGGGCTATGTCAGAACTTGTAAGGCACCCAAGGGTTATGAAGAGACTTCAAGAAGAGTTAAATAACGTAGTGGGGACAAATAAGCAAGTGGAAGAGTCTGACTTGACAAAGTTGCCTTATTTGAATATGGTGGTGAAAGAGACCTTAAGATTGTATCCTGTTGGACCCTTATTGGTGCCTCGTGAGTCCCTACAAGATATTACAATTAATGGATATTACATAAAGAAGAAGTCAAGAATTTTAATCAATGCATGGGCAATAGGACGAGACTCAAAAGTATGGTCAGATAATGCTGAGATATTTTATCCAGAGAGATTTGTGAATAAGAATATAGACATTAGAGGACATGACTTTCAACTTATACCATTTGGTTCTGGTCGCAGAGGATGTCCTGGGATACAATTAGGTCTGACAACTGTTGGTCTTGTTCTGGCTCAATTAGTGCATTGCTTTAATTGGGAGCTTCCATTCGGCATGTCTCCTAATGACTTGGACATGACTGAGAAATTTGGTCTTTCCCTTCCAAGAAACACACACTTGCTAGCTATACCAACTTATCGCTTATTTAACAAAGATTAG 1530 0.4007 MLVETLAIPAALLVIFILILSSALLHPNQVEDDRRHPPGPKALPIIGNLHMLGKLPHRSLQTLAKKYGPIMSIKLGQVSTIVVSSPEAAELFLKTHDTVFASRPKTQASEYMSYGSKGMVFSEYGPYWRNVKKLCTTQLLSASKVEMFAPLRREELGLFVKSLEKAAASRDVVNVSEQVGELISNIVYKMILGSNNDDRFDLKGLTQEVLHLCGVFNMADYIPWADFFDLQGLKGKFMKTIKAFDQVFEQIIKDHEYPFGSNKKSVYSEDFVDILLSFMHQPMNKHEQKHVIDRTNIKAIILDMIAGAFDTSAVVIEWAMSELVRHPRVMKRLQEELNNVVGTNKQVEESDLTKLPYLNMVVKETLRLYPVGPLLVPRESLQDITINGYYIKKKSRILINAWAIGRDSKVWSDNAEIFYPERFVNKNIDIRGHDFQLIPFGSGRRGCPGIQLGLTTVGLVLAQLVHCFNWELPFGMSPNDLDMTEKFGLSLPRNTHLLAIPTYRLFNKD 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00204 509 Gene3D Cytochrome P450 28 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00204 509 PANTHER CYTOCHROME P450 93A3-LIKE 9 506 - -
Cca08g00204 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Cca08g00204 509 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00204 509 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00204 509 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00204 509 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00204 509 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00204 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00204 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00204 509 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00204 509 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 506 - -
Cca08g00204 509 Coils Coil 330 350 - -
Cca08g00204 509 SUPERFAMILY Cytochrome P450 37 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00204 509 Pfam Cytochrome P450 37 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00204 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00204 509 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00204 509 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00204 Cca-Chr8 2845473 2847763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00204 13 502 Cytochrome P450 AT3G26300 39.960 7.09e-131 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00204 - - gmx:100782181 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00204 08 2845473 2847763 Cca08g00204 08 2845473 2847763 ECH