Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00203 ATGTTTCTGGCTATCCCTGCAACACTCCTTGTGATATTCATTTTGATTGTATCCTATGTGTTGGTGCATCGAAAGCAGCTTGAAGATGATACGAAACATCCACCAGGTCCTAAGGCCCTACCAGTCATTGGTAGCCTTCACTTGCTAGGGAAACTCCCACATCGAGCCCTTCAAGACCTAGCCAAAAAATATGGACCCATAATGTCCATCAAGTTAGGGCAAGTCCCAACCATTGTGGTTTCCTCACCCGAAGCCGCTGAGTTATTCCTTAAGACTCACGACACTGTCTTTGCTAGCAGGCCCAAAACTCAAGCATCGGAATACATGTCTTATGGCACTAAGGGCATAGCTTTCACTGAGTATGGTCCTTATTGGCGCAACGTGAGAAAGTTGTGCACCACTCAACTTCTAACTGCATCAAAAGTTGAGATGTTTGCTCCACAGAGGAGGGAAGAGTTAGGGCTGTTGGTGAAGTCACTTGAAAAAGCAGCAGCCAAAGGTGATTTGGTGAATGTCAGCGAGAAGGTTGAGGAGCTTATAGCAAATGTTGCCAGTAAAATGATACTTGGTCACAGTAAGGACCATAGATTCGACGTGCCGGGGCTTGTTAATGGGTATCTGCATTTGCTTGGATTGTTCAATGTTGCAGATTATGTACCTTGGGTCGGCATCTTTGATCTCCAGGGACTAAAAGAAAAATTCAAGAAAACAAGTAAGGCATTTGATCAAGTGTTCGATGAAATCATCGAGGAGCATGAAGACCCTTCTTATAAAGACAAGAGAAATGTGCACTCTAAGTACTTTGTGGACATATTGTTGTCACTTATGCACCAACCCATGGATCATCATGAACAAAAGCATTTCATTGATAGAACTAACATCAAGGCTATTTTAATGGATATGTTTGCTGCATCATTTGACACTTCTGCTGTTGCGATTGAGTGGGCTATGTCAGAACTCCTAAGGCACCCAAGGGTGATGAAGAAACTTCAAGATGAGTTAACAAATGTAGTGGGAATAAATAGGGTGGTGGAGGAGTCTGACTTAACAAAGTTGTCATATTTGAACATGGTAGTGAAAGAGACCTTACGGTTGTATCCGGTTGGACCCTTGCTAATTCCTCGTGAGTCCTTAGAAGATATCACAATTAACGGATATTTCATAAAGAAAAAGTCAAGAATTTTAATCAATGCATGGACAATTGGACGAGATCCTAAGGTTTGGTCAGATAATGCTGAGATATTTTATCCAGAGAGATTTGTGAACAACGATATAGATATTAGAGGACATGACTTTCAACTTATACCATTTGGTTCTGGCCGCAGAGGATGTCCTGGGATACAATTGGGTCTAATTACTTTTAGTCTTGTTCTGGCTCAATTAGTGCATTGCTTCAATTGGGAGCTTCCATCTGGTATCTCTCCTAATGACTTAGATATGACTGAAAAATTTGGTCTTTCCTTACCAAGAAGTAATCACTTGTTAGCAGTACCATCTTATCGCCTATTGAATACAGCTTAA 1521 0.4142 MFLAIPATLLVIFILIVSYVLVHRKQLEDDTKHPPGPKALPVIGSLHLLGKLPHRALQDLAKKYGPIMSIKLGQVPTIVVSSPEAAELFLKTHDTVFASRPKTQASEYMSYGTKGIAFTEYGPYWRNVRKLCTTQLLTASKVEMFAPQRREELGLLVKSLEKAAAKGDLVNVSEKVEELIANVASKMILGHSKDHRFDVPGLVNGYLHLLGLFNVADYVPWVGIFDLQGLKEKFKKTSKAFDQVFDEIIEEHEDPSYKDKRNVHSKYFVDILLSLMHQPMDHHEQKHFIDRTNIKAILMDMFAASFDTSAVAIEWAMSELLRHPRVMKKLQDELTNVVGINRVVEESDLTKLSYLNMVVKETLRLYPVGPLLIPRESLEDITINGYFIKKKSRILINAWTIGRDPKVWSDNAEIFYPERFVNNDIDIRGHDFQLIPFGSGRRGCPGIQLGLITFSLVLAQLVHCFNWELPSGISPNDLDMTEKFGLSLPRSNHLLAVPSYRLLNTA 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00203 506 PANTHER CYTOCHROME P450 93A3-LIKE 9 503 - -
Cca08g00203 506 Pfam Cytochrome P450 34 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00203 506 Coils Coil 162 182 - -
Cca08g00203 506 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00203 506 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00203 506 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00203 506 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00203 506 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00203 506 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00203 506 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00203 506 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00203 506 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00203 506 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00203 506 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00203 506 Gene3D Cytochrome P450 23 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00203 506 SUPERFAMILY Cytochrome P450 34 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00203 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Cca08g00203 506 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00203 Cca-Chr8 2835897 2839469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00203 31 503 Cytochrome P450 AT5G57260 40.289 1.94e-128 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00203 - - gmx:100781782 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00203 08 2835897 2839469 Cca08g00203 08 2835897 2839469 ECH