Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00202 ATGTTTGTTGAAACTTTAGTTATCCCTACAATAATACTCGTTATTGTGATGATATTCATATTATTGGTACATCCAAAACAAAGGCATGAGAAAAATGCACCAGGTCCGAAGGGTTTGCCATTTATTGGTAACCTCCACATGCTAGGAAAACTCCCACATCGCAGCCTTCAATCCCTTGCCACAAAATATGGACCTATAATGTCCTTAAAGCTAGGTCAGGTTCCAGCCATAGTGGTTTCTTCCCCTGAAACCGCTGAGCTATTCCTCAAAACCCATGACATTGCTTTTGCCAGCAGACCTAAAATTCAATTGTCGGAGTATCTTTCTCATGGCAGCAAGGGCATGTCGTTTTCTGAGTACAGTGCTTACTGGCGCAACGCGAGGAAAGTGTGCACTCTACAGCTTCTGAGTGCGTCAAAAATTGAAATGTTTGCTCCTTTAAGGAGAGAGGAGTTGGGAGCGTTGGTGAAGTCGCTGAAAAATTCAGCGGCATCACGTGAGGTTGTGGATCTGAGTGAGTTGTTGGGGGAGCTCATGGAGAACATCGTGTGTAAGATGGTGTTGGGGCGTGCCATTGATCATAGGTTCGATTTGAAAGGGCTTATTTATGAGGTCATGAACTTGGCTGGTGCTTTCAATCTTGCAGATTACATGCCTTGGCTCAGCGTCTTTGATCCTCAGGGACTAACAAGGCGATTAAAGAAAGTAAGCAAGACATTTGACCAAGTCATGGAGCAGATTATCCAAGACCACGAGCATCCACATAATAAAAAACAAAAAGGATCAAGCAACAAAGACTTTGTGGACATATTGCTATCACTTATGCACCAACCCATGGGTCTTGAGGACGACCAAAATGTCTTGGATAGAAGTAATATCAAAGCTATTATAATAGATATTATTGCAGCAGCATTTGACACGGCATCTACAACGGTTGAATGGGCCATGTCAGAACTCTTGCGGCATCCAAATGTGATGAAAACTCTTCAGGATGAGCTAGAAAATGCAGTGGGATTGAAGAAACATGTGAAGGAAATTGACGTGCAAAATTTGCCTTATTTGAATATGGTGGTCAAGGAGACCCTAAGATTACATCCGGTTGCACCTTTGCTCCTGCCTCATGAGTGTCGAGGAGATGTTACTATTAATGGTTATTATATAAAGAAGAAAACAAGGCTCATAGTAAATGCATGGGCAATAGGGCGAGATCCTAATGTTTGGTATAATGCTGAGATGTTTGATCCCAAGAGATTTGAGAATAACAATATTGACATTCGTGGAAATGACTTTCGAGTGATACCATTTGGTTCAGGTCGAAGAGGTTGTCCTGGGATTCATATGGGTCTAACTACTGTTAACCTTATTCTGGCTCAGTTAGTACATTGTTTTGATTGGGTGCTTCCATTAGGCATGACTCCTGATGAGTTAGACATGAATGAGATATTTGGACTCACGATACCCAGAAGTAAACACTTGTTGGCCATACCAGTTTATCGACTAGTTGATCAATAA 1512 0.4187 MFVETLVIPTIILVIVMIFILLVHPKQRHEKNAPGPKGLPFIGNLHMLGKLPHRSLQSLATKYGPIMSLKLGQVPAIVVSSPETAELFLKTHDIAFASRPKIQLSEYLSHGSKGMSFSEYSAYWRNARKVCTLQLLSASKIEMFAPLRREELGALVKSLKNSAASREVVDLSELLGELMENIVCKMVLGRAIDHRFDLKGLIYEVMNLAGAFNLADYMPWLSVFDPQGLTRRLKKVSKTFDQVMEQIIQDHEHPHNKKQKGSSNKDFVDILLSLMHQPMGLEDDQNVLDRSNIKAIIIDIIAAAFDTASTTVEWAMSELLRHPNVMKTLQDELENAVGLKKHVKEIDVQNLPYLNMVVKETLRLHPVAPLLLPHECRGDVTINGYYIKKKTRLIVNAWAIGRDPNVWYNAEMFDPKRFENNNIDIRGNDFRVIPFGSGRRGCPGIHMGLTTVNLILAQLVHCFDWVLPLGMTPDELDMNEIFGLTIPRSKHLLAIPVYRLVDQ 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00202 503 Pfam Cytochrome P450 34 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00202 503 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00202 503 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00202 503 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00202 503 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00202 503 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00202 503 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00202 503 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00202 503 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00202 503 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00202 503 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00202 503 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00202 503 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00202 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Cca08g00202 503 Gene3D Cytochrome P450 23 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca08g00202 503 PANTHER CYTOCHROME P450 93A3-LIKE 11 501 - -
Cca08g00202 503 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 501 - -
Cca08g00202 503 SUPERFAMILY Cytochrome P450 34 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00202 Cca-Chr8 2815145 2826011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00202 24 501 Cytochrome P450 AT5G57260 41.068 5.34e-132 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00202 - - gmx:100782715 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02695 09 52596886 52599786 Cca08g00202 08 2815145 2826011 PCT