Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00153 ATGCCGCGATCCAGTTCGGCAGCGCACCACCACCGTCAGAGCTCCGATAACTTCATCCTCGACGCTCACGGAAGGTGGTTACACTCTTCGAGTTTCGCGCAGGAGTTCGGGACTCGATCTTCGAGCTTAAGGAAAAACGACGATGATCGCGTTTTGACCAGTGGCTTGCTTGATCTGCATTCCTTCGATACCGAACTTTTACCTGAGGTTTGTTTTGATGACTATGAGTCAATTCTTTCTGGCAACAAACTTGTACAAAGGTCTCGGGGCTTGCCTGAGAGCCATCTCCTTAAAAGTGTCTCAACAGATAAAGAGAGAGCGAACAATGTGGCCAAGATCAAAGTTGTGGTTCGGAAGAGACCACTAAATAAGAAGGAAATAACAAAGAGAGAGGAAGATATCATTTCCATAGATTCAAATTTTCTCACAGTGCATGAAAGAAAACTAAAGGTTGACTTAACAGAATATGTTGAGAAACACGAGTTTGTTTTCGATGCTGTGCTGAATGAAGGTGTTTCAAATGATGAAGTGTATGCCGAGACTGTGGAGCCAGTTGTTCCGCTGATTTTCCAACGAACAAAAGCAACTTGCTTTGCATATGGTCAAACTGGGAGTGGGAAGACATATACTATGCAACCATTGCCTCTCAAAGCTTCCCAAGATATTTTAAGATTAATGCACCATACATACCGGAACCTGGGTTTCCAATTGTTTGTTAGTTTCTTTGAAATATATGGGGGAAAACTTTTTGATCTCCTCAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGGAAACAGCAGGTTTGCATTGTTGGCTTGCAAGAATTTAGAGTATCTAAAGTTGAGACAATCAAGGAATTTATTGAGAAAGGAAATGCCTCAAGAAGTACTGGTACAACTGGAGCAAACGAGGAATCCTCCCGATCACATGCTATACTTCAGCTTTGTATTAAGAGATCAGCTAATGGAACTGAATCAAAGCCTGCTCGAATTGTGGGCAAATTATCTTTTATAGATCTGGCTGGAAGTGAACGTGGTGCAGATACTACAGATAATGACAAGCAGACTAGGATTGAAGGGGCAGAAATAAATAAAAGCTTACTTGCTCTGAAAGAATGCATTAGAGCTCTTGACAATGATCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACTGAAGTTCTGCGAGACTCTTTTGTTGGTGATTCACGTACTGTAATGATATCATGCATTTCACCTAGTTCAGGTTCATGTGAACATACTCTTAACACATTAAGATATGCTGACAGGGTGAAGAGCCTGTCCAAAGGGAACAGTTCTAGAAGGGATCCCCTTTCTAACTCAAACCTTAGAGACTCCACTGTGTTGCCTGGGTCTTCAGTTTTATCTCATGATGATACCTTTGAGGAGGAAACAACATATGTTTCCAGTGATAGGAATCAATTTGGTTGGCCCAAACAACAGGAAAGAGAACCCTCTCCTCCAAATAATGTGGAGCGTGTTCCAAGTGGTAGAATGGGGGGAAATTTGGTGCCATCTGTGTATTCTGATCCACAAAATGGTCAACGAGGTAGTCAAAATGACAGAACTGCAAATGAATATGATTACCTAGGACCAACATATGAACAAGACAAAACAAGAAAGACAAGTAAGAGGGTGGATAACAACCAGTTATCTGCTGTGGAGGACAAGAGAAAGAAAGAATCTCGTGTTAAACGTGTGGATGCATCACATTCTGAGGCTAATCATTCTGATCCCGACGATAATTTAAATGCTCTCCTGAAGGAAGAGGAAGATCTTGTAACTGCACATCGGAGACAGGTGGAGGAAACAATAGACATTGTTAAGGAGGAGATGAATTTACTCGTCAAAGCTGACCAACCAGGAAATCAACTGGATGATTATATTTCCAAATTGAATACCATTTTATCACAAAAGGCTGCAGGAATTTTTCAGTTGCAAACACAGTTGGCTCAATTTCAGAGACGTTTAAATGAGTATAACGTTTTTGTATCTTCTGGTAATTGA 2031 0.4116 MPRSSSAAHHHRQSSDNFILDAHGRWLHSSSFAQEFGTRSSSLRKNDDDRVLTSGLLDLHSFDTELLPEVCFDDYESILSGNKLVQRSRGLPESHLLKSVSTDKERANNVAKIKVVVRKRPLNKKEITKREEDIISIDSNFLTVHERKLKVDLTEYVEKHEFVFDAVLNEGVSNDEVYAETVEPVVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILRLMHHTYRNLGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEFRVSKVETIKEFIEKGNASRSTGTTGANEESSRSHAILQLCIKRSANGTESKPARIVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRRDPLSNSNLRDSTVLPGSSVLSHDDTFEEETTYVSSDRNQFGWPKQQEREPSPPNNVERVPSGRMGGNLVPSVYSDPQNGQRGSQNDRTANEYDYLGPTYEQDKTRKTSKRVDNNQLSAVEDKRKKESRVKRVDASHSEANHSDPDDNLNALLKEEEDLVTAHRRQVEETIDIVKEEMNLLVKADQPGNQLDDYISKLNTILSQKAAGIFQLQTQLAQFQRRLNEYNVFVSSGN 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00153 676 ProSitePatterns Kinesin motor domain signature. 334 345 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca08g00153 676 MobiDBLite consensus disorder prediction 434 590 - -
Cca08g00153 676 CDD KISc_KIF2_like 112 433 - -
Cca08g00153 676 Pfam Kinesin motor domain 118 434 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g00153 676 Gene3D Kinesin motor domain 92 438 IPR036961 -
Cca08g00153 676 PANTHER KINESIN-RELATED PROTEIN 6 38 674 - -
Cca08g00153 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 435 IPR027417 -
Cca08g00153 676 PRINTS Kinesin heavy chain signature 335 353 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g00153 676 PRINTS Kinesin heavy chain signature 385 406 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g00153 676 PRINTS Kinesin heavy chain signature 301 318 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g00153 676 PRINTS Kinesin heavy chain signature 192 213 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g00153 676 MobiDBLite consensus disorder prediction 439 462 - -
Cca08g00153 676 MobiDBLite consensus disorder prediction 475 495 - -
Cca08g00153 676 ProSiteProfiles Kinesin motor domain profile. 112 435 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca08g00153 676 MobiDBLite consensus disorder prediction 514 534 - -
Cca08g00153 676 MobiDBLite consensus disorder prediction 541 590 - -
Cca08g00153 676 PANTHER KINESIN-LIKE PROTEIN 38 674 - -
Cca08g00153 676 SMART kinesin_4 110 441 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00153 Cca-Chr8 2158170 2163967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00153 111 435 Calmodulin-binding Proteins AT5G65930 34.328 3.63e-45 172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00153 08 2158170 2163967 Cca08g00153 08 2158170 2163967 ECH