Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00142 ATGCATTTCGTGTATTCACTGATGCACAGCCTATTGCAGGTGTCATATACATCATGGTTCCTTGATGCCTTCAATTATGCAATTGCAACCGATATGGATGTGCTAAATTTAAGCATAGGTGGACCTGATTACTTGGATCTACCATTTGTTGAAAAGATATGGGAGATAACAGCAAATAACATAATCATGGTTTCTGCAATTGGAAATGATGGACCACTTTATGGAACTTTGAACAATCCAGCTGATCAAAGTGATGTCATTGGTGTTGGTGGTATTGACTATAGTGACCATATAGCATCCTTTTCCTCACGTGGCATGAGTACTTGGGAGCTTCCTCATGGTTATGGCCGTGTAAAGCCAGACATAGTTGCATATGGACGGGACATAATGGGATCAAAGATTAGTGCGGGTTGTAAAAGTTTATCCGGAACTAGTGTTGCAAGTCCTGTAGTTGCTGGTGTTGTATGTTTGCTTGTTAGTGTCATTCCTGAACATGATAGAAAGAATATCTTAAACCCAGCAAGCATGAAACAAGCATTGGTTGAGGGTGCTGCAAAGCTTTCTGGGCCTAACATGTATGAGCAGGGCGCCGGCAGAGTTAACCTGTTAGAATCATATGAGATTCTTAAAAGCTACAAACCTAGGGCAAGCATCTTTCCCAGTGTTCTTGATTATACAGATTGTCCTTATACATGGCCCTTTTGTCGTCAGCCACTCTATGCAGGTGCCATGCCGGTCATCTTCAATGCCACCATTTTAAATGGAATGGGTGTTATTGGATATGTTGATAGTCCACCAACATGGCATCCTTCTGATGAAGAAGGGAATCTTCTAAGCATACATTTTACTTATTCTGAGATCATCTGGCCTTGGACTGGTTATTTGGCCCTTCACATGCAAATCAAGGAAGAAGGTGCACAGTTTTCTGGAAAGATCGAAGGTAATGTGACTCTGAAGGTTTCTAGCCCTCCCACTCAAGCAGAGAAGGACCCTCGAATTAGCATCTGTGTGCTTCATTTAAAGTTAAATGTGGTGCCAACACCACCACGATCAAAACGAATTTTGTGGGATCAGTTTCACAGTATCAAATACCCACCAGGTTATATTCCCAGAGATTCCTTGGATGTTCGCAATGACATCCTTGACTGGCATGGAGATCATTTGCATACAAATTTTCACATCATGTTCAACATGTTACGGGATGCTGGTTACTATGTTGAAACCCTTGGTTCTCCTCTTACATGCTTTGATGCTCGACAGTATGGAACACTTCTGTTGGTGGATCTTGAGGACGAATACTTTGCTGAGGAGATTGAAAAACTGAGAGATGATGTTGTAAATACTGGATTAGGATTAGCTGTCTTTGCTGAGTGGTATAATGTAGATACCATGGTAAAGATGAGATTCTTTGATGACAATACACGGAGCTGGTGGACCCCAGTTACCGGAGGTGCTAATATTCCTGCACTGAATGATCTTTTGGCTCCATTTGGGATTGCTTTTGGAGATAAGATTCTGAATGGTGATTTTTCACTTTTGGGTGAACAGAATCGTTATGCTTCTGGAACAGATATAGTGAGATTTCCAAGGGGTGGCTATGTACATAGCTTTCCATTCTTAGATAGTTCAGAAAGTGGGGCCACACAGAATGTGCTAACTTCTGGCTCAACCAAGGCAGATTCTCCTATTCTTGGTCTCACAGTAATGGGTGAGGGTCGCATAGCAGTGTATGGGGACTCAAATTGTTTGGACAGTAGCCATATGGTTACTAATTGTTTTGCCCTTCTGAGGAAAATACTAGATTTTACTAGTGAGGATGTCAGAGACCCAACACTTTTCACTGATTCAAATAAACAAGATTCTTCCTTGTACGAAGTTGACAATCAGTTGCCATCCCGCAGAACGGATGTAAATTTCTCTGCATATTCAGCTATTGTTGGGAAGGAATTGATATGCAGGACTGACACAAGGTTTGAAATCTGGGGAACTAAGGGCTACAGTTTGCAAGTCAGAGGAAGAAACAGAAGATTGCCTGGTTATCCGGTTATTGATTTGGGGAGGGGTTTCAATTCCACCTCTCATACTTCTAACATTAGGCGTCCTAGGTTGACCGTGACAAATAAGGATAATTCACTGGGGAACAGGTATTTAGGCCTGTTCTATGGAGATGAGCCTGATGTACCTATGCTGGTTGGTAGTCACTGGCTGGTTCCTGTTGTTATTGCTACAACTGGTTAG 2238 0.4209 MHFVYSLMHSLLQVSYTSWFLDAFNYAIATDMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISAGCKSLSGTSVASPVVAGVVCLLVSVIPEHDRKNILNPASMKQALVEGAAKLSGPNMYEQGAGRVNLLESYEILKSYKPRASIFPSVLDYTDCPYTWPFCRQPLYAGAMPVIFNATILNGMGVIGYVDSPPTWHPSDEEGNLLSIHFTYSEIIWPWTGYLALHMQIKEEGAQFSGKIEGNVTLKVSSPPTQAEKDPRISICVLHLKLNVVPTPPRSKRILWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPLTCFDARQYGTLLLVDLEDEYFAEEIEKLRDDVVNTGLGLAVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLLGEQNRYASGTDIVRFPRGGYVHSFPFLDSSESGATQNVLTSGSTKADSPILGLTVMGEGRIAVYGDSNCLDSSHMVTNCFALLRKILDFTSEDVRDPTLFTDSNKQDSSLYEVDNQLPSRRTDVNFSAYSAIVGKELICRTDTRFEIWGTKGYSLQVRGRNRRLPGYPVIDLGRGFNSTSHTSNIRRPRLTVTNKDNSLGNRYLGLFYGDEPDVPMLVGSHWLVPVVIATTG 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00142 745 Pfam Subtilase family 16 189 IPR000209 GO:0006508|GO:0008236
Cca08g00142 745 SUPERFAMILY Subtilisin-like 14 202 IPR036852 GO:0004252|GO:0006508
Cca08g00142 745 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 526 687 - -
Cca08g00142 745 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 12 497 - -
Cca08g00142 745 PANTHER PEPTIDASE S8 526 687 - -
Cca08g00142 745 Gene3D Peptidase S8/S53 domain 6 217 IPR036852 GO:0004252|GO:0006508
Cca08g00142 745 ProSiteProfiles Serine proteases, subtilase domain profile. 1 209 - -
Cca08g00142 745 ProSitePatterns Serine proteases, subtilase family, serine active site. 143 153 IPR023828 -
Cca08g00142 745 PANTHER PEPTIDASE S8 12 497 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00142 1 745 Subtilisin-like Serine Gene Family AT5G19660 78.695 0.0 1237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00142 K08653 - gmx:100797547 1429.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00142 08 1978703 1985349 Cca08g00142 08 1978703 1985349 ECH