Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00136 ATGTATAGACCATTCATGACATGTGATGATCCAAAAGGGGTTGTTGAGTGTGGGGCTATAAGGAAATACAGGACCAGTTCTCACAAAATGAAGGACAAGACAAAAACTAGGAGGCCGGCAGAGGCATCATTGGCTACCAAACAAGACAAAGAAGAGAAGCTTTCAAAAGGATCCACAGAAAGGTCCTTTGATCCATCATCCTTGCAGCTCATGGAGGTGTCCAGAGGGGCTCAAAGGTTGAATAACATGATTGAGTCATGGTCTAAGGGTCTTGGCTATGATGGAAGGTCTGAAGATATAGCAAAAGATTTGCTAAAAGGGGCTCTTGACCTGCAAGAATCTCTATTAATGCTTCGCAAGGTGCAAGAAGCTTCACAAAACACGGCTAGTTTGAAGAGAAAACAAGATAGGAAGCCTGAGAGAGGCAGATTTGATGCAAAGGTGGTTGATGGAACTTCACATTGTGATCATTTTGGAGAACAAAGTTGTCCAATGGGATTCCAAAGACGTTGGGTGAACCCTTCAGCTGATGCTTCTTCAAGTAGTTGTACTGAGGAACTCAAGAAGGTGATTACAGAGAGCTTGGTTAGGCAAAATTTGTTCAACACTGAAGGGTTGGATTCAGCATCCACATTCCACTCTACAAACTCAAGCCAATCCTCTGTGGCTTGGAATGATAGGCTTTCTGATTCTTCTTTCTCACCCACAACTTCGAGGGGGGAAAGAGGACCTAATCTTGTTGCCAAGCTGATGGGCTTGGAAGAAGCCCCCTCAAGATCATTTCCAGCTGTTAAACAGTTGGAGAGTCCAAAGATTCTCAATCAGAAGAGGCCTATGTTTGACATAGATATGCCTAAGGTAAGAAAAAATGTTGAGAAGGTTAATCTGGAACATAAGATGACCTTGAGGGAAATTCTTGAAACTACTCATTTCAATGGACTTTTGAAAAGTCCTGTCAGAGAGCCTAAGGTTCAGGTTCATCATTTCATTGATCCACATTATAAACATGTTGGTGATTTACCTCCCATTGTGCTTATAAAACCGCGATGTACTCCATATCAGGAATGTATGAGAAGTTATGAGCATGTTGTTCCTCCAGAGGAGTTACCCCTTAGAAATCTAAAATCAAAAGCAGTCCCTTCCCAAATTTTCCAACACAGAGAAGGCTCAACCGCCAACATGGGGAAAAAAATGGAAGAATATGTATCCAAAAGGCTTGCCAAAGAGGAAAGAACTAAGGTCCTCAGAGAGGTTGTGGAACTGAAGGAAAAAGAAATCAAGCCTGTTGAAAATGAGAAGGCTCCAGGAGGGAAGGTAAAACTGCATTGTCATGTCAGTCACAAATCACAGGTAAATGAAAATGTTGATAAAAAAGCTAAGGTAAAGGGCATTACCAATATTATTAGCAGAAAGCTACCACAAAAAGAGGTTTCAAAGCCTAAAGTTGTGGCAAAATCTCATGATCAAGGAGAAATCAGCTCAACTAGTACAAAGTTGAGGAAGCCACAAAGTGGGTCCAGAATTGACAAGAATGAGATTCCACTTAGAAAGATCACTGCTTCAAATTCAAACACCATCTCAAAACCAAAGAGTCAGAAAATCAGCAATTCCAAGGAACAGAGAAAGAATCAGATGAAGAAGCCAAGGTCTGCTGTTGCTGAGCCTGAAGCAGCTAAACCAGTTGAGGAACAGTTAGAACAAGAACAACCAAAGAGTGTTGATGTTTCTTGTAAAGATGATTGCCCTGAGATTAAAATAATCACTACAATAACAGATGATCTCGCAATTGAGTGTGAAAAAATACATGCAACTTCAAATAAGATTACAGAAAATTGTGAGCAAAGCCAGAGTTCTTCCGGTGATGATATTTTGATGCTAAAATCTGAACATGAAAATGAACCTTTCCCTGCTGAGGAATCTCAAGACAGCACAAATATCAGTGAAACAAATTGCAACAAGCCTGACAAAGACTGTGATGAGCTGAAATATACGCTTCTAACTAGCCAATCATTTATTGAACACGCAGAGGAGTTCCTCGATCTTGAAGTTGATTGTCTCAAGATCCTACCAAGAAGTGAAACCAAGGAAATAGCCAATCTCAGACTTTATTTGGATTGTGCAAATGAACTCACTGAGAGCAAAAGCCTTCAGGGGTCACAAGCACTTCACCCTTTATTGCTAACTTGTTCAGGGAATCCAAGAATGCACATCTCTTTAGGAAGGTTGGTTGATGAAGTCTATAGTGCCATTGAGAATCTGACATCTTACAGTGAAAAGCTAGCTTCAGATAATATCTATGCAATGATGGAGAGAGATATAAAGAGCAACAATGGACTGATGAATGGAATATGGAACTGGGGTTGGAGGCATGGATTTTCTGCAGATGAAGCAGAGCAAGTTGTGAATGAAGTGGAGAACCTAGTTTTAGGTGGATTGATTGAGGAGGTAATTGTAAATTTATGA 2463 0.4056 MYRPFMTCDDPKGVVECGAIRKYRTSSHKMKDKTKTRRPAEASLATKQDKEEKLSKGSTERSFDPSSLQLMEVSRGAQRLNNMIESWSKGLGYDGRSEDIAKDLLKGALDLQESLLMLRKVQEASQNTASLKRKQDRKPERGRFDAKVVDGTSHCDHFGEQSCPMGFQRRWVNPSADASSSSCTEELKKVITESLVRQNLFNTEGLDSASTFHSTNSSQSSVAWNDRLSDSSFSPTTSRGERGPNLVAKLMGLEEAPSRSFPAVKQLESPKILNQKRPMFDIDMPKVRKNVEKVNLEHKMTLREILETTHFNGLLKSPVREPKVQVHHFIDPHYKHVGDLPPIVLIKPRCTPYQECMRSYEHVVPPEELPLRNLKSKAVPSQIFQHREGSTANMGKKMEEYVSKRLAKEERTKVLREVVELKEKEIKPVENEKAPGGKVKLHCHVSHKSQVNENVDKKAKVKGITNIISRKLPQKEVSKPKVVAKSHDQGEISSTSTKLRKPQSGSRIDKNEIPLRKITASNSNTISKPKSQKISNSKEQRKNQMKKPRSAVAEPEAAKPVEEQLEQEQPKSVDVSCKDDCPEIKIITTITDDLAIECEKIHATSNKITENCEQSQSSSGDDILMLKSEHENEPFPAEESQDSTNISETNCNKPDKDCDELKYTLLTSQSFIEHAEEFLDLEVDCLKILPRSETKEIANLRLYLDCANELTESKSLQGSQALHPLLLTCSGNPRMHISLGRLVDEVYSAIENLTSYSEKLASDNIYAMMERDIKSNNGLMNGIWNWGWRHGFSADEAEQVVNEVENLVLGGLIEEVIVNL 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00136 820 MobiDBLite consensus disorder prediction 516 533 - -
Cca08g00136 820 PANTHER OS01G0228800 PROTEIN 1 818 - -
Cca08g00136 820 MobiDBLite consensus disorder prediction 476 571 - -
Cca08g00136 820 PANTHER OS01G0228800 PROTEIN-RELATED 1 818 - -
Cca08g00136 820 MobiDBLite consensus disorder prediction 25 66 - -
Cca08g00136 820 MobiDBLite consensus disorder prediction 632 651 - -
Cca08g00136 820 MobiDBLite consensus disorder prediction 488 502 - -
Cca08g00136 820 MobiDBLite consensus disorder prediction 207 241 - -
Cca08g00136 820 Coils Coil 404 424 - -
Cca08g00136 820 MobiDBLite consensus disorder prediction 534 553 - -
Cca08g00136 820 MobiDBLite consensus disorder prediction 207 243 - -
Cca08g00136 820 MobiDBLite consensus disorder prediction 34 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00136 Cca-Chr8 1883126 1887319 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00136 661 817 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 32.738 7.28e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00136 - - gmx:100797863 1306.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02663 09 52231030 52235222 Cca08g00136 08 1883126 1887319 PCT