Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00105 ATGGCGGAGGGCTCAAGAAACAAGAGAAAAAACGTGGCGGTGGAAGAAGACCGAGGGAAAACCACCGACATTATTGAACAACGCAAAGAAAGTGCGAAGAACGTTAACGAAATCAAAGAAACTGGACAAGGCGTTGACGAGGTGGAGAGAGAGAAACTGAGGGAGCTTCTTTACATGAAGGACGACGAGAAGCAACTTGATTTCATCCTCAGCGCTGGACACGTGCAAGAGTGCAACCTAAGCCTTCCGTACCGAACTCAACTGAGCAGCGACAAGTGGAACCTGTTCCTGCGACCAGGTTTCGAGGACAACAACCTTTCGGGGTACCTCAGGGACTTCGAAGACGTTAGGGCTGCGATTGCAGTCAACGTGTTCGACAAAGGTGGCCATGAATTCGAGATGATGCTGAAGAAGTGGGTGATAGGGAGGGATTCTTTCTTTGTGCTGAACCGAGGGTGGTTCAATTTCTGCAGCCAGCACTATCTGGGGGAAGATGATGTCATCGCCATTCGCACATTTCGCCATAAGATATCAAGGAAGCTTTCATTTGTTGTTACTTACAAGAAAATGAAGTGA 576 0.4826 MAEGSRNKRKNVAVEEDRGKTTDIIEQRKESAKNVNEIKETGQGVDEVEREKLRELLYMKDDEKQLDFILSAGHVQECNLSLPYRTQLSSDKWNLFLRPGFEDNNLSGYLRDFEDVRAAIAVNVFDKGGHEFEMMLKKWVIGRDSFFVLNRGWFNFCSQHYLGEDDVIAIRTFRHKISRKLSFVVTYKKMK 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00105 191 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 7 190 IPR005508 GO:0003677
Cca08g00105 191 MobiDBLite consensus disorder prediction 1 22 - -
Cca08g00105 191 CDD B3_DNA 109 186 IPR003340 GO:0003677
Cca08g00105 191 PANTHER B3 DOMAIN PLANT PROTEIN 7 190 - -
Cca08g00105 191 Gene3D - 60 191 IPR015300 -
Cca08g00105 191 SUPERFAMILY DNA-binding pseudobarrel domain 113 183 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00105 80 189 B3 DNA Binding Superfamily AT4G03170 30.172 7.11e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00105 - K06636 pvu:PHAVU_004G169500g 156.762