Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00087 ATGGTAGTGGTAGTTGCACTCGCATTGGTTCTGGGTCTCTTCCTCGCCCTTCTTCTTTTCAACCCACGACACCGCAAATCAGGGAATAATGGAAAAGCTCAAGCCAGTGTAAACAATGATAAGGCATCGAAATCCTACAGTAAAACGGAAGTTTCATTGCATAACAAGAGAACAGATTGTTGGATAATCATCAAGAACAGGGTATATGATGTTACCTCATATGTGGAAGAACATCCAGGCGGTGATGCCATTCTAGCACATGCTGGAGATGATTCAACTGAAGGGTTTTTTGGACCACAGCATGCAACTCGAGTCTTTGACATGATTGAAGACTTCTACATTGGAGATTTGGAGCAATAG 360 0.4278 MVVVVALALVLGLFLALLLFNPRHRKSGNNGKAQASVNNDKASKSYSKTEVSLHNKRTDCWIIIKNRVYDVTSYVEEHPGGDAILAHAGDDSTEGFFGPQHATRVFDMIEDFYIGDLEQ 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00087 119 PANTHER CYTOCHROME B5-LIKE PROTEIN 3 118 - -
Cca08g00087 119 Gene3D - 36 119 IPR036400 -
Cca08g00087 119 PRINTS Cytochrome B5 signature 68 78 IPR001199 -
Cca08g00087 119 PRINTS Cytochrome B5 signature 78 92 IPR001199 -
Cca08g00087 119 PRINTS Cytochrome B5 signature 105 117 IPR001199 -
Cca08g00087 119 Pfam Cytochrome b5-like Heme/Steroid binding domain 48 117 IPR001199 -
Cca08g00087 119 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 74 81 IPR018506 GO:0020037
Cca08g00087 119 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 43 118 IPR001199 -
Cca08g00087 119 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 42 118 IPR036400 -
Cca08g00087 119 PANTHER CYTOCHROME B5 3 118 - -
Cca08g00087 119 SMART Cyt_b5_2 46 118 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00087 Cca-Chr8 1128205 1131386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00087 3 117 NADPH P450 reductases AT1G60660 61.667 1.97e-51 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00087 - - gmx:100527821 210.305