Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00081 ATGAAAAAATTTACCTCATCATGTGTCAAAATGCAAATTCTTCGTCTTCTCTCTTTCTTCCTCTTTCTCACCTATGCAGCCTCTCAGTCTCACTCTTTGTTGTATGATCAAGAACATGCAGTCCTATTGAAGATAAAGCAATACTTGCAAAATCCACCATTCCTCCAACACTGGACCCCATCAAACTCTTCACATTGCTCTTGGGAAGAGATCAGATGCACCAATGGATCTGTCACTGCATTGACTATGTTCAACACCAACATCACTCAAAAACTGCCAACTTTCCTATGTGACCTCACAAACCTCAAACACATTGATTTTCAGTTTAATTACATTCCTGGGGAGTTTCCAACGTCTCTCTACAACTGCTCCAAGCTTGAGTACCTTGACCTCTCACAGAACTTCTTTGTTGGTAAGATTCCTGATGACATTGATCACTTGGCCAATCTACAGTTTCTTAACCTTGGTGGCAACAACTTCTCTGGTGATATTCCAGCCAGCATTGGGAGGTTGAAGGAGCTAAGAACCCTTCAACTTTATCAGTGTCTTTTCAATGGAACTTTCCCTGCTGAAATTGGCAATTTGTCCAACCTTGAATACTTGTATGTATTCTCCACCAGCATGCTCTCTCCCACAAAATTGCCATCAAGCTTGACCCAGTTGAATAAATTGAAGGTCTTTCATATGTATGAATCCAACTTGGTAGGGGAAATCCCTGAAGCCATTGGAAACATGGTGGCATTGGAGGAACTGGATTTATCAAAGAATGGTTTAAGTGGACAAATTCCCAGTGGTTTGTTCATGCTGAAAAATCTGAGTGTACTATATCTTTACAGCAACAGCCTCTCTGGGGAGATACCTGGAGTGGTTGAAGCATTCAGCTTGACAGACCTTGATCTTTCAGACAATAGTCTTAGTGGGAAAATACCAGATGATTTTGGAAAGCTTAACAACTTAACGCACTTGTCTTTGTCTATGAATCAGTTATCTGGGAAAGTACCAGAAAGCATTGGTCATCTGCCAAATCTCACTGATTTTGTTGTTTTTCTCAACAATTTGTCGGGTACACTTCCTCTAGACTTCGGTCGGTTCTCGAAGCTTGAAACATTTCAGGTTGCATCTAATAGTTTCACAGGAAGGATGCCAGAGAACTTATGCTACTGTGGAAGGTTAGTTGGTCTAACTGCTTATGACAATAACCTGAGTGGGGAGTTGCCAGAATCCTTAGGAAGTTGCAATAGCCTGCAATATCTGAGGGTTGAAAACAATGAGCTTTCTGGAAACATTCCCAGTGGTCTATGGACATCTATGAATTTGGAAACATTGATGATAAATGAAAATAAGTTCACTGGTCAGCTTCCTGAAAGATTGTCTTGGAATCTTTCATTCCTGGCCATAAGCTACAATCAGTTTTCTGGTGGAATTCCACATGGAGTGTCTTCTTGGAAAAGTGTTGTGGTGTTCAATGCCAGTAACAACTTCTTCAATGGTAGTATTCCACTAGAGCTAACATCTCTTTCCCAGCTAACAACTCTTCTGCTTGATCATAACCAGCTCACAGGGCCACTTCCATCAGATATAACATCATGGAAGTCCCTAATAACTCTAGATTTGAGCCACAATCGACTCTCTGGCGAAATTCCAGATGCAATTGCTCAGTTGCCTGCCCTTAATATTTTGGATATGTCAGCGAACAAAATCTCAGGAGAAATTCCACTTCAACTAGCCCTTACAAGAATCACAAATCTCAATCTGTCCTCCAATCATTTGACGGGGAGGATCCCAAGTGAATTTGAAAACCTTGGGTATGCTAGAAGCTTTTTGGACAATTCTGGTCTGTGCGCTGGTACCACAGTGCTAAACCTTACCTTGTGCAATTCTAGGTCTCAAAGTGCAAGAATTGAAAGAAAATCTGAGTCTCATGCTATAATGATTACCCTGGTGGTAGCAGCCTCCATACTGGCTTTGTTGTCATCATTGTTGATGATCAGAGTTTACATCAAAAGAAAGCAAGAATTGAAAAGGTCATGGAAGCTCACTTCCTTTCAGAGGCTGAGTTTCACAAAAGCAAACATTGTGTCCTCAATGTCAGAACACAATATCATTGGCAGTGGAGGATATGGTGAAGTATATCGTGTTGCTGTTGATGATTTAGGCTATGTTGCAGTGAAAAAGATATGGGGTAGCAGAACTTTAGAGCAGAAGCTTGTAAGTTCATTTCTTGCAGAAGTTGAAATACTGAGCAATATTCGTCACAAAAACATTGTAAAGTTGCTATGCTGCATCTCCAATGAGGATTCTCTGCTCCTTGTCTATGAGTATCTGGAAAACCATAGCCTTGACAGATGGCTTCACAAGAAAAGTAAGACATCACCTGTGTCAGGTTCAGTCCTTGATTGGCCAAAGAGATTGCATATAGCCATCGGAGCTGCACAAGGTTTGTGCTACATGCATCATGATTGCTTATCACCCGTTGTTCATAGAGATGTTAAAACAAGTAACATTCTGTTGGATTCTCAATTCAATGCAAAAGTTGCTGATTTTGGTCTGGCCAAGATGTTGATGAAGCCAGAAGAATTTGCTACCATGTCAGCCGTGGCTGGCACATTTGGCTATATTGCTCCAGAATATGCTCAAACAACAAGAGTCAATGAGAAGATAGATGTGTATAGTTTTGGAGTAATCCTATTGGAACTGACAACTGGAAAAGAAGCCAATCATGGAGATGAATACTCATCTCTTGCGGAATGGGCGTGGCGCCACATTCAGGTAGGGACCGATGTAGAAGACATTTTGGATGAAGAAATTAAGGAAGCATGTTACATAGATGAAATGTGCAACATCTTCAAACTAGGGGTCATGTGCACTGCAACACTTCCAGCTAGTAGACCTTCCATGAAAGAAGTCCTGAAAATACTGCTCTCCTGCAGCAATCCACTTACCAATGGAGAGAAGAAAGCTGGTTTCAATGATGCTGTTCCACTTCTTGAGAATTCAAATTGGGAAAAGCAGGTGGAATTCTATAGTGATGATGATTGA 3039 0.4107 MKKFTSSCVKMQILRLLSFFLFLTYAASQSHSLLYDQEHAVLLKIKQYLQNPPFLQHWTPSNSSHCSWEEIRCTNGSVTALTMFNTNITQKLPTFLCDLTNLKHIDFQFNYIPGEFPTSLYNCSKLEYLDLSQNFFVGKIPDDIDHLANLQFLNLGGNNFSGDIPASIGRLKELRTLQLYQCLFNGTFPAEIGNLSNLEYLYVFSTSMLSPTKLPSSLTQLNKLKVFHMYESNLVGEIPEAIGNMVALEELDLSKNGLSGQIPSGLFMLKNLSVLYLYSNSLSGEIPGVVEAFSLTDLDLSDNSLSGKIPDDFGKLNNLTHLSLSMNQLSGKVPESIGHLPNLTDFVVFLNNLSGTLPLDFGRFSKLETFQVASNSFTGRMPENLCYCGRLVGLTAYDNNLSGELPESLGSCNSLQYLRVENNELSGNIPSGLWTSMNLETLMINENKFTGQLPERLSWNLSFLAISYNQFSGGIPHGVSSWKSVVVFNASNNFFNGSIPLELTSLSQLTTLLLDHNQLTGPLPSDITSWKSLITLDLSHNRLSGEIPDAIAQLPALNILDMSANKISGEIPLQLALTRITNLNLSSNHLTGRIPSEFENLGYARSFLDNSGLCAGTTVLNLTLCNSRSQSARIERKSESHAIMITLVVAASILALLSSLLMIRVYIKRKQELKRSWKLTSFQRLSFTKANIVSSMSEHNIIGSGGYGEVYRVAVDDLGYVAVKKIWGSRTLEQKLVSSFLAEVEILSNIRHKNIVKLLCCISNEDSLLLVYEYLENHSLDRWLHKKSKTSPVSGSVLDWPKRLHIAIGAAQGLCYMHHDCLSPVVHRDVKTSNILLDSQFNAKVADFGLAKMLMKPEEFATMSAVAGTFGYIAPEYAQTTRVNEKIDVYSFGVILLELTTGKEANHGDEYSSLAEWAWRHIQVGTDVEDILDEEIKEACYIDEMCNIFKLGVMCTATLPASRPSMKEVLKILLSCSNPLTNGEKKAGFNDAVPLLENSNWEKQVEFYSDDD 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00081 1012 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 1004 - -
Cca08g00081 1012 Pfam Leucine Rich Repeat 581 601 IPR001611 GO:0005515
Cca08g00081 1012 Gene3D Transferase(Phosphotransferase) domain 1 775 991 - -
Cca08g00081 1012 Gene3D Ribonuclease Inhibitor 292 546 IPR032675 -
Cca08g00081 1012 Pfam Protein kinase domain 698 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00081 1012 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 15 1004 - -
Cca08g00081 1012 Gene3D Ribonuclease Inhibitor 547 630 IPR032675 -
Cca08g00081 1012 ProSiteProfiles Leucine-rich repeat profile. 532 554 IPR001611 GO:0005515
Cca08g00081 1012 ProSitePatterns Protein kinases ATP-binding region signature. 702 725 IPR017441 GO:0005524
Cca08g00081 1012 Gene3D Ribonuclease Inhibitor 35 187 IPR032675 -
Cca08g00081 1012 Pfam Leucine rich repeat 294 352 IPR001611 GO:0005515
Cca08g00081 1012 Pfam Leucine rich repeat 507 567 IPR001611 GO:0005515
Cca08g00081 1012 Pfam Leucine rich repeat 101 160 IPR001611 GO:0005515
Cca08g00081 1012 SMART LRR_sd22_2 554 585 - -
Cca08g00081 1012 SMART LRR_sd22_2 316 339 - -
Cca08g00081 1012 SMART LRR_sd22_2 269 284 - -
Cca08g00081 1012 SMART LRR_sd22_2 99 131 - -
Cca08g00081 1012 SMART serkin_6 696 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00081 1012 Pfam Leucine rich repeat N-terminal domain 37 73 IPR013210 -
Cca08g00081 1012 Gene3D Ribonuclease Inhibitor 188 291 IPR032675 -
Cca08g00081 1012 Gene3D Phosphorylase Kinase; domain 1 666 774 - -
Cca08g00081 1012 SUPERFAMILY L domain-like 43 378 - -
Cca08g00081 1012 SMART LRR_typ_2 316 340 IPR003591 -
Cca08g00081 1012 SMART LRR_typ_2 147 171 IPR003591 -
Cca08g00081 1012 SMART LRR_typ_2 506 530 IPR003591 -
Cca08g00081 1012 SMART LRR_typ_2 245 269 IPR003591 -
Cca08g00081 1012 SMART LRR_typ_2 99 123 IPR003591 -
Cca08g00081 1012 SMART LRR_typ_2 577 600 IPR003591 -
Cca08g00081 1012 SMART LRR_typ_2 531 554 IPR003591 -
Cca08g00081 1012 SUPERFAMILY RNI-like 294 603 - -
Cca08g00081 1012 ProSiteProfiles Protein kinase domain profile. 696 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00081 1012 SUPERFAMILY Protein kinase-like (PK-like) 689 973 IPR011009 -
Cca08g00081 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 825 837 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00081 Cca-Chr8 1052710 1056682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00081 38 973 Receptor kinase-like Gene Family AT5G25930 52.548 0.0 982
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Cca08g00081 Pkinase 7.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00081 - - gmx:100785907 1682.92