Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00074 ATGGGGAACAAAATCGCGCGCACGACGCAGGTTTCGGCGTCGGAGTACTATCTCCACGACTTGCCGTCGACGTACAATCTTGTTCTGAAGGAGGTGTTAGGTCGCGGTCGCTTCTTCAAGTCGATTCAGTGCAAACACGACGAGGGTTTGGTCCTCGTCAAGGTCTATTTCAAGCGTGGCGATTTCCTCGATCTCTCCGATTACGAGCGCCGTCTCTCTCAGATTAAACAAATCTTTACCACAATCGATCACCCTCACGTTTGGCCCTTTCAGTTTTGGCAAGAAACGGATAAAGCGGCATATCTTCTGAGGCAGTATTTCTTCCATAATCTGCATGATAGGTTAAGCACACGCCCGTTTCTTAGTTTTGTTGAGAAGAAATGGTTGGCTTTTCAGTTGCTTGTAGCTGTAAAACAGTGCCACGAGAATGGAGTGTGTCACGGTGATATCAAGTGTGAGAATGTGCTGATTACATCCTCCAATTGGCTTTACCTTGCTGACTTTGCATCCTTCAAACCCACTTATATTCCATATGATGACCCGTCTGATTTCTCTTTTTTCTTTGACACTGGTGGACGGAGACTCTGTTATCTTGCACCCGAGAGATTTTATGAACATGGAGGGGAGATGCAGGTGGCACAAGATACCCCCTTAAAACCCTATATGGATATCTTTGCTGTAGGGTGTGTAATTGCTGAACTTTTCCTTGAGGGGCAGCCACTATTTGAACTTTCTCAACTTCTTGCTTATCGCAGAGGGCAATATGATCCAAGTCAACATCTTGAAAAAATACCGGATCTTGGGGTTCGTAAGATGATATTGCACATGATTCAGTTAGAACCAGAGTCTCGATTTTCTGCTGAAAGATATCTAAAGGAATATGCCGCAGTTGTATTTCCGACCTATTTTTCACCATTTCTACATGAATTTTACCGATGCTGGAGTCCTCTTCATTCTGATATGAGGGTTTTACTATGCCAAAGTGCTTTCCCGGAGATACTTAAACAAACAATGAACAATAAGTCATCTGATGACGCAGGTGTTAATTCTGGGGCACTTTTAGAAGAGATGGTTGCTAAAGAAAGTGTAAGTTTCATGAAGGATTCACTGGTGAAGAGAGAGGACATAGGCAAGGGCTTAGTCCATGATCACTATGAACTTCTTGGTGATATTAATAGCCTACTGAGGGATGCTAAAAAAAATAATAATCCATCTCATGTAACAGGAAATGCACATAATTCTACCTTTCCTGAAAATCTAAAAAATTTGCAGACTGGTAAACTGCTTCAAACTATCTCCAATGCATTTCGTGGAAATGACCATCCCTTTCTGAAAAGTATTACTATGAATGATTTAAATTCATTGATGTCTGAGTATGATAGTCAATCAGATACATTTGGAATGCCTTTTCTACCCTTACCAAAGGATAGTATGAGATGTGAAGGCATGGTTTTGATAACTTCTTTGCTCTGCTCCTGCATACGCAATGTCAAGTTGCCTCACCTGAGGAGGGCAGCTGTACTCTTGTTGAAGGCTTCTGCCCTATATATTGATGATGAAGATCGTTTGCAGCTTGTTATCCCATATGTGATTGCAATGCTTTCAGATCCAGCAGCAATTGTGCGTTGTGCTGCTTTGGAGACTTTGTGTGACATTCTTCCTTTAGTGCGGGATTTTCCTCCCAGTGATGCTAAGATATTTCCCGAGTATATTCTTCCAATGCTTTCTATGCTTCCTGATGATCCAGAGGAAAGTGTGAGGATATGCTACGCTAGCAATATAGCCAAGTTGGCATTGACTGCTTATGGATTCTTACTACGCTCAATAAGCTTGAGTGAGGCAGGTGTCCTTGATGAATTGAGTTCATCACAAAAGCCATTGACATCATCCACTCAGTCCTCTGGAAGAATGAAGAAGATAAATGGTGATGTCCAACTTCTGAAGTTGAGGAAATCCATTGCAGAGGTTGTTCAAGAACTTGTTATGGGTCCAAAGCAAACCCCAAATATAAGGAGAGCACTTCTTCAGGATATTGGTAAACTGTGTTGCTTCTTTGGTGTGAGACAGAGTAATGACTCTCTCTTACCTATACTTCCTGCTTTCTTAAATGATCGGGATGAGCAATTAAGGACTGTATTCTATGAAAAGATAGTTTATGTCTGTTTTTTTGTGGGCCAAAGAAGTGTAGAAGAATATTTATTACCTTACATTGAGCAAGCTTTAAGTGACGTGACAGAAGCTGTCATTGTTAAAGCTGTAGAATGTTTGACTTTTCTATGCAAAAGTGGGTTCTTCCGAAAGAGGATATTGCTTCAAATGATAGAGCGTGCTTTTCCTTTATTGTGTTATCCTAGTGAATGGGTACGGAGATCAGTTGTCTCTTTTATTGCTGCTAGCAGTGAGAGCTTGGGTGCAGTAGATTCTTATGTTTTCCTTGCTCCTGTTATACGGCCTTTCCTCCGCAGGCAACCTGTGTCTCTTGCTTCAGAGAAGGCTCTTCTATCATGTTTAAAACCTCCTGTTGCAAGACAGGTTTTCTATGAAGTCTTGGAGAATTCCAGGAGTTCAGACATGTTAGAAAGACAGAGAAAAATATGGTATAGTTCTTCACAATCTAAATTATGGGAAATGGATTTACTGAAAAAAGGAATTGATGAGTTGGACTCATTAAAGAGTTGGACTGACAAGCAACAAGGTCCTGGGATTCAACAAACTGTTGGCACTGGCTTCCAACAACCAGGGCTAACTGATTGTGACAAAGCGGAGGCAAAATTGAGAGATATGGGAGTGTTTATGCCTAATGATAGCAATACTGTGGGACATCGTGATAACCAAAGCTTGGAGAAGTTACAGTTTTCAGGATTTATGTCACCAAATTTTAGTGGCATGAACAGTCTGACATATGAAAAGCCATCAGAAGGCATACCTTTGTATTCCTTCAGTGTGGACAGGCGAGGAATGGGAATCACACCTGCAGCATCGGATCCTCCATTACCAATGAATTCTCTCGGTGTTAGTTCATCTGCAATGCCTTGGGTTAATCCACATAGTAAGTCCTTTAATTTGGCTAGTTCAGTTCCAGCACCAAAGCTTTTTTCAGGTTCTTTTAGTATCAGCAATGGTTCTAAACAGTTTCATCGAGTGGTACATGAACCAGATGCCAGGGAAAATGAGACAGCCTATGTTAGTAGCACATTTCAAGATGTGGGATTATCTGCTAATATTAAAGGTACTTCAGTCGCACTGGAAGATGCAACTGCCCAAACTGATCTATCAGGATTTCCATCTTTTACTCGAGCATCCATTCCTGATTCTGGTTGGAGGCCCCGTGGAGTGCTGGTTGCACATCTCCAGGAGCACCGTTCAGCTGTCAATAACATAGCTATTTCTGCTGATCATTGCTTCTTTGTGAGTGCATCTGATGATTCTACAGTCAAGATTTGGGATTCCAGAAAGCTGGAAAAAGACATTTCATTCAGATCAAAGCTAACTTATCACCTTGAGGGAAGCCGTGTGTTGTGTGCAACAATGCTTCCAGGTTCTACACAAGTTATAATTGGAGCATCCGATGGATTTATTCATATGTTTTCTGTTGATCATATCTCTAGAGGTCTAGGAAACGTTGTTGAGAAATATTCGGGTATTGCTGATATCACAAAGAAGGATATCAAGGAAGGTGCGATACTCAACCTTTTGAATTGCCCTGTGGATAATTATACCATTATGTATAGCACCCAGAACTGTGGCATTCATCTGTGGGATACTAGGTCAGATTCCAATACCTGGACACTCAAAGCTACTCCTGAGGAGGGCTATGCTTCTTCTCTGGCATCAGGGCCTTGTGGTAATTGGTTTGTATCGGGGTCATCCCGGGGAGTTATTACACTTTGGGATCTGAGATTTCTTATACCTGTGAATTCTTGGAAGTCTTCTCTTGCTTGCCCTATAGAAAAAATGTGTCTCTTTCTTCCTCCTTCAAATGCTTCTGTGTCTTCAGCTGCTAGACCCCTTGTTTATGTGGCTGCTGGCTGCAATGAAGTTTCTCTTTGGAATGCAGAGAATGGTAGCTGCCACCAGGTTCTAAGGATGGCCAATTATGAAAGTGATGCCGAAATGTCTGATCTGCCTTGGGCCTTGGCCAGACCTTCAAGTAAGCCAACTTCTCAATCAGATCTAAGACGAAATGTTAATCGTAAGTATGGAGTTGATGAGTTAAATGAACCTCCTCCTCGTCTTCCTGGTATTCGTTCATTACTTCCCTTGCCTGGGGGTGATTTATTGACTGGAGGCACTGATTTAAAGATACGTCGTTGGGATCATTACAGTCCTGACAGAAGTTACTGTATATGTGGACCAAACTTGAAAGGAGTAGGAAATGATGATTTTTATGAAACAAAATCTAGTTTTGGGGTTCAAGTTGTACAGGAAACGAAAAGACGTCCTCTTACAATCAAGCCGACGACGAAGGCACTTCTTGCAGCTGCTGCCACTGATTCTGCTGGTTGCCACCGTGACTCTGTTGTTTCTTTGGCTTCTATTAAGTTAAACCAAAGACTCTTGCTTTCAAGTGGCAGAGATGGGGCCATCAAGGTTTGGAAGTAA 4602 0.4196 MGNKIARTTQVSASEYYLHDLPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDFLDLSDYERRLSQIKQIFTTIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSFVEKKWLAFQLLVAVKQCHENGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDTPLKPYMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDLGVRKMILHMIQLEPESRFSAERYLKEYAAVVFPTYFSPFLHEFYRCWSPLHSDMRVLLCQSAFPEILKQTMNNKSSDDAGVNSGALLEEMVAKESVSFMKDSLVKREDIGKGLVHDHYELLGDINSLLRDAKKNNNPSHVTGNAHNSTFPENLKNLQTGKLLQTISNAFRGNDHPFLKSITMNDLNSLMSEYDSQSDTFGMPFLPLPKDSMRCEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYIDDEDRLQLVIPYVIAMLSDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLLRSISLSEAGVLDELSSSQKPLTSSTQSSGRMKKINGDVQLLKLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCCFFGVRQSNDSLLPILPAFLNDRDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDVTEAVIVKAVECLTFLCKSGFFRKRILLQMIERAFPLLCYPSEWVRRSVVSFIAASSESLGAVDSYVFLAPVIRPFLRRQPVSLASEKALLSCLKPPVARQVFYEVLENSRSSDMLERQRKIWYSSSQSKLWEMDLLKKGIDELDSLKSWTDKQQGPGIQQTVGTGFQQPGLTDCDKAEAKLRDMGVFMPNDSNTVGHRDNQSLEKLQFSGFMSPNFSGMNSLTYEKPSEGIPLYSFSVDRRGMGITPAASDPPLPMNSLGVSSSAMPWVNPHSKSFNLASSVPAPKLFSGSFSISNGSKQFHRVVHEPDARENETAYVSSTFQDVGLSANIKGTSVALEDATAQTDLSGFPSFTRASIPDSGWRPRGVLVAHLQEHRSAVNNIAISADHCFFVSASDDSTVKIWDSRKLEKDISFRSKLTYHLEGSRVLCATMLPGSTQVIIGASDGFIHMFSVDHISRGLGNVVEKYSGIADITKKDIKEGAILNLLNCPVDNYTIMYSTQNCGIHLWDTRSDSNTWTLKATPEEGYASSLASGPCGNWFVSGSSRGVITLWDLRFLIPVNSWKSSLACPIEKMCLFLPPSNASVSSAARPLVYVAAGCNEVSLWNAENGSCHQVLRMANYESDAEMSDLPWALARPSSKPTSQSDLRRNVNRKYGVDELNEPPPRLPGIRSLLPLPGGDLLTGGTDLKIRRWDHYSPDRSYCICGPNLKGVGNDDFYETKSSFGVQVVQETKRRPLTIKPTTKALLAAAATDSAGCHRDSVVSLASIKLNQRLLLSSGRDGAIKVWK 1533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00074 1533 ProSiteProfiles Trp-Asp (WD) repeats profile. 1117 1149 IPR001680 GO:0005515
Cca08g00074 1533 ProSiteProfiles Trp-Asp (WD) repeats profile. 1500 1533 IPR001680 GO:0005515
Cca08g00074 1533 ProSiteProfiles HEAT repeat profile. 526 558 IPR021133 -
Cca08g00074 1533 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1117 1149 - -
Cca08g00074 1533 Gene3D - 665 838 IPR011989 -
Cca08g00074 1533 Gene3D - 475 619 IPR011989 -
Cca08g00074 1533 CDD STKc_Vps15 16 303 - -
Cca08g00074 1533 SUPERFAMILY ARM repeat 418 821 IPR016024 -
Cca08g00074 1533 SUPERFAMILY WD40 repeat-like 1114 1531 IPR036322 GO:0005515
Cca08g00074 1533 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1533 IPR045162 GO:0004674|GO:0016236|GO:0045324
Cca08g00074 1533 Gene3D - 1222 1533 IPR015943 GO:0005515
Cca08g00074 1533 Gene3D - 1056 1219 IPR015943 GO:0005515
Cca08g00074 1533 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00074 1533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Cca08g00074 1533 ProSiteProfiles Protein kinase domain profile. 27 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00074 1533 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1500 1533 - -
Cca08g00074 1533 SMART WD40_4 1488 1533 IPR001680 GO:0005515
Cca08g00074 1533 SMART WD40_4 1257 1298 IPR001680 GO:0005515
Cca08g00074 1533 SMART WD40_4 1405 1439 IPR001680 GO:0005515
Cca08g00074 1533 SMART WD40_4 1110 1149 IPR001680 GO:0005515
Cca08g00074 1533 SMART WD40_4 1158 1197 IPR001680 GO:0005515
Cca08g00074 1533 Pfam HEAT repeat 526 554 IPR000357 GO:0005515
Cca08g00074 1533 Pfam WD domain, G-beta repeat 1113 1149 IPR001680 GO:0005515
Cca08g00074 1533 Gene3D Transferase(Phosphotransferase) domain 1 22 307 - -
Cca08g00074 1533 ProSiteProfiles HEAT repeat profile. 694 732 IPR021133 -
Cca08g00074 1533 SUPERFAMILY Protein kinase-like (PK-like) 26 322 IPR011009 -
Cca08g00074 1533 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00074 Cca-Chr8 957039 965447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00074 17 242 MAP Kinase Gene Family AT2G42880 25.424 2.32e-10 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Cca08g00074 Pkinase 5.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00074 K08333 - gmx:100818467 2906.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca08g00074 08 957039 965447 Cca08g00074 08 957039 965447 ECH