Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca08g00014 ATGTCGAGGCTGAATTCAGAGAAGAAGTTGGGTGCAGGACGTGTGGTGGCTGTGGCCATTGAGAATAACAAGACAAGCCAACATGCTGCCAAGTGGGCAGTGGACAATCTTCTTCCAAAGGATCAATGTCTTTTACTAATCCATGTTAGACAAAGAGCATCGGATTCAAGCGAAACTGTGGGCGACAGCGAAACCAAGGAACTTTTTGATTCATTTCGAGTCTTCTGCAACAGAAAAAATATACAATGCAGAGAAGTGTTGTTGGACGACATGGATATATCTAAGGCATTAGTAGAAAGCATTTCCACGAATTCCATCGAGCTTCTTGTACTTGGGGCGCCATCAAGGGGTGGCCTTGTTAGAAGATTTAGGACAACGGATGTTCCTAGCAATGTGTCCAAAGGCGCACCACCATTCTGCACAGTTTATATAATCTCCAAAGGAAAAATCTCAAGTGTGAGATCTGCTACTGCTCCATTGGCTCTTAAACCCTCACCACCACCGCGTAACCCACCACCCccacaacaacaaccacaaccacaaccacaaccaTTCCCTGAAAGATTAATTGACGCTCAACCAACCCGCAATAATTACCCTCCACGACCTTCATCAGAGAGGGCCTTTGCGAGTACCGGGACACGCCACATGACGTTGGATGATGATGATATCATATCACCATTCACAAGGTTTGGAAGAACATACGAGTCTTCTAAACTTCCGGATTCTGATATATCATTCGTGAGCAGCGGAAGGCCAAGCATTGATCGAATGTTCCCAACATTGTACGATGATCTGGATAGTGCGAGTGCGAGTGGAAGTATTGCCCCGGGTAGGTTTTCTATCGGCTCAGATTACGAAGCCCGAAGCATCGTTTCATCCCTCTCCTCACGAGGAGTCAATAACATGGATGACTTCTCCTTCTCCTCGCAATCAAGGTCATCCGATTGCTCGGATGATGTGGAATGGGAGATGAGGAGGCTGAAGCTAGAACTGAAGCAGACAATGGAAATGTACAGCTCAGCTTGCAAGGAAGCTAAGACGGCAAAGCAGAAGGCAATGGAGCTTCAACGTTGGAAAGCGGAAGAAGAGAAGAAATTATCTGATGAGTCGCGAACAACGGATGAAGTATCAGCCATGGAGGAGGAGCAGGAAAAGATTAGATCAGAAGCACTCGGAAATATTGCGGCGTTGGAAGCACAAAAGAAAATAAGCGCCGAGAGGAAGAAGCCGGGTGATAGCTTTGCCTCTGGCATGTACAGAAGATACAGCATTGAGGAAATTGAAGAGGCAACAAACATGTTTTCGGACAACCTCAAGATCGGCGAAGGAGGCTATGGTCCAGTTTACAGATGTGAATTAGATTGCACCCAGGTTGCAATCAAGGTTGAAGTGCTGAGTTGCATAAGGCATCCAAACATGGTTCTGCTGCTGGGAGCGTGTCCAGAATATGGTTGCCTAGTGTACGAATACATGGCGAATGGAAGCTTGGATGATTGCTTGTTCAGGAGTGGGTCACGTCCACCTCTTCCATGGCAGCTAAGGTTCCAAATTGCAGCAGAGATAGCCACAGGCCTTCTCTTCCTTCACCAGACAAAGCCAGAGCCACTTGTCCACCGTGACTTGAAACCCGGCAACATTCTCCTCGACAGAAACTACGTGAGCAAGATCAGCGACGTGGGGTTGGCCAGGCTGGTTCCTCCTTCAGTTGCTGACACTGTCACACAGTATCGCATGACTTCCACTGCTGGAACATTCTGCTACATTGACCCCGAGTATCAGCAAACTGGCATGCTTGGAATCAAATCTGATATTTACTCCCTAGGGATCATGCTTCTTCAAATCATCACTGCCAAGCCTCCTATGGGTTTGACTCATCATGTTGGAAGGGCCATTGAGAAAGGAACTTTTTCTGAGATGCTTGACCCTGCTGTTCAGGACTGGCCAATTGAACACGCCTTGCATTTCGCCAAGCTTTCGCTGCAGTGTGCTGAAATGAGGAAAAAAGATAGGCCTGATCTTGGAAAAGTTGTATTACCTGAACTCAATAAGCTTAGGGCGTTTGCAGAACAAAGCATGTCGCCTATGATGATGTTTGGACTTGGAAGCTGTGGAGCTGGTAATGCATATGCTTCCAGAAACAGTAACTCTTCCATAAATTCCACTTTTTCTTCCTCAACTCAAGACACGAGTGAATCTAACTCACTGTCTGGCTTGTCGGGATATGAAAGCCGCTCAAGCACATCATCACTGGGGAGAATGTAA 2265 0.4623 MSRLNSEKKLGAGRVVAVAIENNKTSQHAAKWAVDNLLPKDQCLLLIHVRQRASDSSETVGDSETKELFDSFRVFCNRKNIQCREVLLDDMDISKALVESISTNSIELLVLGAPSRGGLVRRFRTTDVPSNVSKGAPPFCTVYIISKGKISSVRSATAPLALKPSPPPRNPPPPQQQPQPQPQPFPERLIDAQPTRNNYPPRPSSERAFASTGTRHMTLDDDDIISPFTRFGRTYESSKLPDSDISFVSSGRPSIDRMFPTLYDDLDSASASGSIAPGRFSIGSDYEARSIVSSLSSRGVNNMDDFSFSSQSRSSDCSDDVEWEMRRLKLELKQTMEMYSSACKEAKTAKQKAMELQRWKAEEEKKLSDESRTTDEVSAMEEEQEKIRSEALGNIAALEAQKKISAERKKPGDSFASGMYRRYSIEEIEEATNMFSDNLKIGEGGYGPVYRCELDCTQVAIKVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRSGSRPPLPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIITAKPPMGLTHHVGRAIEKGTFSEMLDPAVQDWPIEHALHFAKLSLQCAEMRKKDRPDLGKVVLPELNKLRAFAEQSMSPMMMFGLGSCGAGNAYASRNSNSSINSTFSSSTQDTSESNSLSGLSGYESRSSTSSLGRM 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca08g00014 754 CDD STK_N 15 148 - -
Cca08g00014 754 Gene3D Transferase(Phosphotransferase) domain 1 423 699 - -
Cca08g00014 754 Gene3D HUPs 3 145 IPR014729 -
Cca08g00014 754 MobiDBLite consensus disorder prediction 197 212 - -
Cca08g00014 754 Pfam Universal stress protein family 14 137 IPR006016 -
Cca08g00014 754 MobiDBLite consensus disorder prediction 161 187 - -
Cca08g00014 754 PANTHER OS02G0152300 PROTEIN 1 754 - -
Cca08g00014 754 ProSiteProfiles Protein kinase domain profile. 435 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00014 754 Pfam Protein tyrosine and serine/threonine kinase 462 677 IPR001245 GO:0004672|GO:0006468
Cca08g00014 754 MobiDBLite consensus disorder prediction 718 754 - -
Cca08g00014 754 MobiDBLite consensus disorder prediction 159 220 - -
Cca08g00014 754 SMART serkin_6 435 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca08g00014 754 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 754 - -
Cca08g00014 754 SUPERFAMILY Protein kinase-like (PK-like) 414 678 IPR011009 -
Cca08g00014 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672|GO:0006468
Cca08g00014 754 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca08g00014 Cca-Chr8 418618 422270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca08g00014 16 693 Receptor kinase-like Gene Family AT5G35380 54.635 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Cca08g00014 PK_Tyr_Ser-Thr 2.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca08g00014 - - pvu:PHAVU_004G177800g 1097.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g02558 09 51142185 51147061 Cca08g00014 08 418618 422270 PCT