Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02554 ATGGATGATGGGGTGATGCGTAAGAAGAAAGGAGGGCTGATAACCAAAACATGGGAGCGATGCAAGTCTATAGGACGAGGCCGCAAGGTGAATTCTTCCAATCCTGTGGCTATGACTCTGAGGAGCAAATCGTGGCCAAGCCGTGAGGGGTCAAAGTCAAAGAAAAGCAGTGTGACCCCTGAAGGTTGCTTCTGTGTTTACGTGGGACCCCAGATGCAGAGATTTGTTATCAAAACTGAGTACGCAAACCATCCCTTGTTCAAGATGTTGCTCGAAGAAGCTGAGTCTGAGTACGGTTACAACAGCCAGGGTCCTTTGGCTCTTCCTTGCCACGTTGACATCTTTTACAAGGTCTTGATGGAAATGGACTGTGAAGAGACTCGTCAAGGCTGCACCTGCGTCAACCGTTCTCCCTCCGCTTATCGTCTTCTTCGCACTTCCTCCATGCATGCCCTCAACCCCTTCTAA 468 0.4979 MDDGVMRKKKGGLITKTWERCKSIGRGRKVNSSNPVAMTLRSKSWPSREGSKSKKSSVTPEGCFCVYVGPQMQRFVIKTEYANHPLFKMLLEEAESEYGYNSQGPLALPCHVDIFYKVLMEMDCEETRQGCTCVNRSPSAYRLLRTSSMHALNPF 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02554 155 MobiDBLite consensus disorder prediction 27 58 - -
Cca07g02554 155 PANTHER OS02G0305950 PROTEIN 11 131 - -
Cca07g02554 155 Pfam Auxin responsive protein 41 119 IPR003676 GO:0009733
Cca07g02554 155 MobiDBLite consensus disorder prediction 26 59 - -
Cca07g02554 155 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 11 131 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02554 Cca-Chr7 54573144 54574222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02554 60 119 Calmodulin-binding Proteins AT3G43120 50.000 6.53e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02554 K14488 - gmx:100777217 230.335