Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02531 ATGCCTAGATCATTGGATCCTCTTGTTATTGGACGTGTAATAGGAGATGTCTTGGATCCTTTTACATGTTGTGTCTCTATGAGGATAATCTATAATAATAGCCATGAAGTTATCAACTGTTGTGAGCTCAAACCCTCACAAATCATCAACCAACCAAGAGTTGAAGTTGGTGGAGATGACCTCAGGAACTGTTACACCCTGGTCATGGTGGATCCTGATGCACCTAGTCCAGGAAATCCAAATCAGAGGGAATATTTGCACTGGTTAGTAGCCAACATTCCAGGAACCACAGGAGCAAACTTTGGTGAAGAAGTTGTTGGTTACGAAAGTCCAAGACCTATGTCGGGGATTCATCGTATTGTTTTCATACTGTTTCGTCAGACTGGAAGACAAACTATATATGCTCCTGGATGGCGCCAAAATTTCAACACCAGAGATTTTAGCGAGCTTTATAATCTTGGATTACCAGTTGCAGCAACCTACTTCAACTGTAAACGTCAAAATGTTTCTGCCAGAGATGGAACTGGAAGAGCCAGATAA 540 0.4185 MPRSLDPLVIGRVIGDVLDPFTCCVSMRIIYNNSHEVINCCELKPSQIINQPRVEVGGDDLRNCYTLVMVDPDAPSPGNPNQREYLHWLVANIPGTTGANFGEEVVGYESPRPMSGIHRIVFILFRQTGRQTIYAPGWRQNFNTRDFSELYNLGLPVAATYFNCKRQNVSARDGTGRAR 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02531 179 Pfam Phosphatidylethanolamine-binding protein 52 160 IPR008914 -
Cca07g02531 179 Gene3D - 3 172 IPR036610 -
Cca07g02531 179 SUPERFAMILY PEBP-like 12 167 IPR036610 -
Cca07g02531 179 PANTHER PROTEIN, PUTATIVE-RELATED 5 170 - -
Cca07g02531 179 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Cca07g02531 179 CDD PEBP_euk 25 164 IPR035810 -
Cca07g02531 179 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 5 170 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02531 Cca-Chr7 54287483 54290196 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02531 K16223 - gmx:100815541 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02531 07 54287483 54290196 Cca09g00028 09 335931 339868 PCT