Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02524 ATGGCGGCAACAGATTATTCTCGGGAGGAGAACGTCTACATGGCGAAGTTGGCGGAGCAGGCTGAGCGGTACGAGGAGATGGTGGAGTTCATGGAGAAGGTTGCGAAGACGGTGGAGGTTGAGGAGTTGACGGTGGAGGAGAGGAATCTTCTCTCCGTGGCTTACAAGAACGTGATTGGGGCGAGGAGGGCTTCGTGGAGGATCATTTCCTCCATTGAGCAGAAGGAGGAGGGTAGAGGCAACGAGGACCACGTGACCGTTATAAAGGAGTACAGGGGCAAGATTGAGGCTGAACTCAGCAAGATCTGTGATGGGATTTTGAACCTCCTTGAGACCAACCTCATCCCCTCTGCTGCAACTCCCGAGTCCAAAGTCTTTTACCTTAAAATGAAGGGTGATTACCATAGGTACCTTGCTGAGTTTAAGACTGGGGCAGAGAGGAAAGAGGCTGCAGAGAGTACATTGCTTGCTTACAAATCGGCTCAGGATATTGCTCTTGCTGACCTGGCCCCCACCCACCCGATTAGGCTTGGACTTGCTCTCAACTTTTCTGTGTTTTATTATGAAATCCTTAACTCACCAGATCGTGCTTGTAACCTTGCCAAGCAGGCATTTGATGAGGCAATTTCTGAGCTTGACACATTGGGTGAAGAGTCATACAAGGATAGTACATTGATCATGCAACTCCTCCGTGACAATCTGACTTTGTGGACATCAGACATCACGGATGATGCTGGAGATGAGATCAAGGAAACATCTAAGCAACAACCAGCTGAATAG 780 0.4923 MAATDYSREENVYMAKLAEQAERYEEMVEFMEKVAKTVEVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDHVTVIKEYRGKIEAELSKICDGILNLLETNLIPSAATPESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKETSKQQPAE 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02524 259 PANTHER 14-3-3 PROTEIN 5 256 IPR000308 -
Cca07g02524 259 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cca07g02524 259 PANTHER 14-3-3-LIKE PROTEIN GF14-F 5 256 - -
Cca07g02524 259 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cca07g02524 259 Coils Coil 14 41 - -
Cca07g02524 259 SMART 1433_4 8 251 IPR023410 -
Cca07g02524 259 PIRSF 14-3-3 2 250 IPR000308 -
Cca07g02524 259 Gene3D - 1 251 IPR036815 -
Cca07g02524 259 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cca07g02524 259 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cca07g02524 259 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cca07g02524 259 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cca07g02524 259 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cca07g02524 259 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cca07g02524 259 Pfam 14-3-3 protein 14 238 IPR023410 -
Cca07g02524 259 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02524 Cca-Chr7 54140820 54142967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02524 7 259 14-3-3 family AT3G02520 88.976 2.91e-169 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02524 K06630 - gmx:547889 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02524 07 54140820 54142967 Cca07g02524 07 54140820 54142967 ECH