Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02514 ATGGCAGCTCTGACTTGCTCTGCAGCTTCACCCATTGGCAAGAAGAAGGTTATCTTTATAATGGGTGCAACTGGCACAGGAAAAACTAAGCTTTCCATCAACTTGGCCACAAAATTCCCCTCCGAAATCATCAACTCTGACAAAATCCAAGTCTACAAAGGCTTTGACATCATCACCAACAAAGTGTCAGAGTCTGAACGTTGTGCCATTCCCCATCACCTGTTAGGCATCATCGATGACCCTGATTATGACTTCACTGTTGATGACTTTTGCAAGAGTGTTCTTGTTGCTCTTGATCTCATCATCAAAAATGGAAGCCTTCCCATCATCGTTGGAGGCTCAAACACTTACCTCACAACACTGCTTCAAGACCCCAACATTGCATTTCGTTCCAAATATGATTGTTGTTTCATTTGGCTTGACGTGTCTTTACCCGTGTTGTTTCAGTATTTAGATAAGAGAGTGGATGAAATGCTTGATGCAGGTGTTGTTGATGAGATTCGAGAAGCTTTTACTCCTGTAGCAGATTACTCTCGAGGGGTTAGAAGAGCCATTGGGGTTCCTGAGCTGGGGGAATATTTGCTTGTAGAGAAGGAAATAAATGATGAGGCTCAAAAGGAGAAGATGCTACAACATGCCATTGTGAGAACCAAAGAGAACACTCGTAAGTTGGCTGAGATGCAACTCTTGAAGATCCATAAGATGAACTATGAACTTGGGTGGAGAATGACTAAAATTGATTCCACACAAGTCTTGGAAGCTGTTTTAAAGGGAATGGATTATAAGTACTTGTACCAAGAGATTGTGTTCAAACCAAGCATTGACATAGTGGAAACATTTCTGAAACAAGGAGGGACACCGCACCAAAATGACCAACAACTCATTTTTTGTGCTTCCAAAATCCTTCAATTTGACTAG 918 0.4172 MAALTCSAASPIGKKKVIFIMGATGTGKTKLSINLATKFPSEIINSDKIQVYKGFDIITNKVSESERCAIPHHLLGIIDDPDYDFTVDDFCKSVLVALDLIIKNGSLPIIVGGSNTYLTTLLQDPNIAFRSKYDCCFIWLDVSLPVLFQYLDKRVDEMLDAGVVDEIREAFTPVADYSRGVRRAIGVPELGEYLLVEKEINDEAQKEKMLQHAIVRTKENTRKLAEMQLLKIHKMNYELGWRMTKIDSTQVLEAVLKGMDYKYLYQEIVFKPSIDIVETFLKQGGTPHQNDQQLIFCASKILQFD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02514 305 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 10 286 IPR039657 -
Cca07g02514 305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 174 IPR027417 -
Cca07g02514 305 Pfam IPP transferase 50 124 - -
Cca07g02514 305 Pfam IPP transferase 131 229 - -
Cca07g02514 305 Gene3D - 14 281 IPR027417 -
Cca07g02514 305 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 10 286 - -
Cca07g02514 305 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 144 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02514 Cca-Chr7 54010657 54011694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02514 98 282 C2H2 Transcription Factor Family AT2G27760 30.806 6.37e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02514 K10760 - gmx:121173984 488.419