Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02513 ATGGCGCCTTTGAATTACTCTACACCTTCTTCACCTGGTGAGAAGAAGAAGGTAGTGTTCATAATGGGAGCAACTGGCACGGGCAAAACCAAGCTTTCCATCAACCTGGGCACTAAATTTCCCTCAGAGATCATAAACTCTGATAAAATTCAAGTCTACAAGGGACTTGACATCATCACCAATAAGGTTCCGGAGTCTGAACGTGGTGGCGTTCCCCATCACCTGTTAGGCGTAATTGAGGATCCTGATTATGACTTCACAGTTGATGACTTCTGCAAGAGTGTTGCTGTTGCGCTTGATCTCATCATCGAAAATGGACGCCTACCAATCATCGTGGGAGGCTCAAACACTTACCTGGCAACACTGCTTGAGGACCCCAACATCGCATTTCGATCCAAATATGATTCTTGTTTCATTTGGCTTGACGTGTCTTTGCCCGTCTTGTTTCCCTATTTAGATAAAAGGGTGGATGAAATGCTTGATTTAGGAGTTGTGGATGAAATTCGACAAGCTTTTGTGCCTGGGGCAGATTGCTCTCGTGGGATTAGAAGAGCCATTGGGGTTCCTGAGCTGGCTGAGTATTTTCTGCTAGAGAAGGAAATAAGTGATGATGTGGCTCAAAAGGAGAAAATGTTGCAACATGCCATTCAGAGAACCAAAGAGAACACTCGTAAGTTGGCTGAGATACAACTCTTGAAGATCCATAGGATGAACTATGAACTTGGATGGACAATGGCCAAAATTGACTCCACACAAGTCTTTGAAGCTATTTTAAAAGGAATGGATTACAAGCAATTGTACCAAGAGATTGTGTTAAAACCAAGCATTGACATAGTCAAAAGATTTTTAGAGAAGGCAACTCGGGAATGGGAGAAGACACCCCTACAAAATACTGAACAAGCCACTATTTGTACCTAA 918 0.4303 MAPLNYSTPSSPGEKKKVVFIMGATGTGKTKLSINLGTKFPSEIINSDKIQVYKGLDIITNKVPESERGGVPHHLLGVIEDPDYDFTVDDFCKSVAVALDLIIENGRLPIIVGGSNTYLATLLEDPNIAFRSKYDSCFIWLDVSLPVLFPYLDKRVDEMLDLGVVDEIRQAFVPGADCSRGIRRAIGVPELAEYFLLEKEISDDVAQKEKMLQHAIQRTKENTRKLAEIQLLKIHRMNYELGWTMAKIDSTQVFEAILKGMDYKQLYQEIVLKPSIDIVKRFLEKATREWEKTPLQNTEQATICT 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02513 305 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 11 295 IPR039657 -
Cca07g02513 305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 174 IPR027417 -
Cca07g02513 305 Pfam IPP transferase 132 231 - -
Cca07g02513 305 Pfam IPP transferase 51 125 - -
Cca07g02513 305 Gene3D - 15 283 IPR027417 -
Cca07g02513 305 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 145 245 - -
Cca07g02513 305 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 11 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02513 Cca-Chr7 54005814 54008122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02513 99 287 C2H2 Transcription Factor Family AT2G27760 31.776 6.29e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02513 K10760 - gmx:121173984 501.901