Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02511 ATGGTTATGGTGGTCCTCACACCCCTTTTGGCCATACTCGCTATTCTCCTACTTAAACTCCTCTATGACAACCTCTCATGCTACTGGCTCACCCCTCTACGCATAAAAAAGATCATGGAGATGCAAGGTGTCCATGGCCCTAAACCTCGTTTCTTCACAGGCAACATCCTAGACATGGCTTCCCTTGTCTCCAAAACAACCTCCCAAGACATGAAAACCATAAGCCATGACATTGTTGGTCGTCTTCTCCCACATTTCCTAGACTGGTCCAGCCAATTTGGAAAGAGGTTCCTATATTGGAATGGTACAGAACCAAGGTTGTGCCTCACTGAGACTGAATTGATCAAAGAGTTTCTTTCTAAATACAGCACAGTATCTGGGAAATCTTGGCAGCAGAGACAGGGTTCAAAGAATTTCATTGGGGAAGGACTGTTGATGGCAAATGGTGAAGATTGGTACCACCAACGTCACATCGTTGCCCCTGCATTCATGGGAGACAGACTTAAGAGCTATGCTGGGCACATGGTGGAATGCACTAAGGAGATGCTCCAATCACTGAAAATTGCATTTGAGAGTGGCCAAACTGAGGTGGAGATTGGTCACTACATGACTAAACTTGCTGCGGATATTATCTCTAGGACTGAGTTTGGCACCAGTTACCAGAAGGGCAAGAAAATATTCCACCTCCTCACACTGCTGCAGAGTCGTTGTGCTCAAGCAAGTCGTCATCTATGCTTTCCTGGAAGCAGGTTTTTTCCAAGCAAGTACAACAGAGAGATAAAATCTTTGAAGATGGAAGTGGAGACTCTTCTGATGGAGATAATACAAAGCAGGAAGGACTGTGTGGAGATTGGAAGAAGCAATTCTTATGGGAATGATTTGTTGGGGATGCTCCTGAATGAGATGCAGAAGAAGAAAGGGAGTGGAAACAGCATAAATTTGCAGCTAGTTATGGATCAATGCAAAACATTTTTCTTTGCTGGACATGAAACCACTGCTCTTTTACTCACTTGGACAGTTATGTTACTAGCTAGCAATACTTCTTGGCAAGACAGAGTCAGAGCTGAGGTTAAAAGTGTTTGTGATGGGGGAATTCCCTCTCTGGATCAACTCTCCAAACTCACTCTTTTGCATATGGTGATCAACGAATCAATGAGGTTGTACCCTCCAGCATCTGTGCTTCCTAGAATGGTGTTTGAAGACATAGTGCTAGGTGACCTTTATATCCCTAAGGGCTTATCAATTTGGATTCCTGTGTTGGCCATTCACCACAGCGAAAAGTTATGGGGCAAAGATGCAAATGAGTTCAACCCTAAGAGGTTCACCTCAAAGTCTTTTGTCCCTGGAAGATTTTTACCATTTGCTTCTGGCCCTAGAAATTGTGTTGGACAAGCATTTGCACTAATGGAAGCTAAGATTATATTAGCAATGTTGATTTCAAGGTTTAGCTTCACCATTTCTGAAAATTACCGTCATGCCCCTGTGGTTGTCCTCACAATTAAGCCCAAATATGGGGTTCAAGTTTGTTTGAAGCCCTTGGAGCACCCATGA 1551 0.4371 MVMVVLTPLLAILAILLLKLLYDNLSCYWLTPLRIKKIMEMQGVHGPKPRFFTGNILDMASLVSKTTSQDMKTISHDIVGRLLPHFLDWSSQFGKRFLYWNGTEPRLCLTETELIKEFLSKYSTVSGKSWQQRQGSKNFIGEGLLMANGEDWYHQRHIVAPAFMGDRLKSYAGHMVECTKEMLQSLKIAFESGQTEVEIGHYMTKLAADIISRTEFGTSYQKGKKIFHLLTLLQSRCAQASRHLCFPGSRFFPSKYNREIKSLKMEVETLLMEIIQSRKDCVEIGRSNSYGNDLLGMLLNEMQKKKGSGNSINLQLVMDQCKTFFFAGHETTALLLTWTVMLLASNTSWQDRVRAEVKSVCDGGIPSLDQLSKLTLLHMVINESMRLYPPASVLPRMVFEDIVLGDLYIPKGLSIWIPVLAIHHSEKLWGKDANEFNPKRFTSKSFVPGRFLPFASGPRNCVGQAFALMEAKIILAMLISRFSFTISENYRHAPVVVLTIKPKYGVQVCLKPLEHP 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02511 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 3 510 - -
Cca07g02511 516 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g02511 516 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g02511 516 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g02511 516 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g02511 516 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g02511 516 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g02511 516 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g02511 516 Pfam Cytochrome P450 90 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g02511 516 Gene3D Cytochrome P450 29 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g02511 516 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 510 - -
Cca07g02511 516 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g02511 516 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g02511 516 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g02511 516 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g02511 516 SUPERFAMILY Cytochrome P450 46 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02511 Cca-Chr7 53948058 53952295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02511 1 375 Cytochrome P450 AT5G38450 66.313 1.18e-171 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02511 K10717 - gmx:100808392 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02511 07 53948058 53952295 Cca07g02511 07 53948058 53952295 ECH