Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02497 ATGAATGACTCCACGGTGAAGAATTTGGCTATCACGGAGAAGAAGGTGCAGCACAAGCCTGGTGGTTGTGTTGGCATTTTCTTTCAGCTCATTGATTGGAAGAGGAAACTCTCCAAGAAGAAGCTATTCTCCAAGAAACTTCTTCCTCCTGCTCGTGCAAAAAAGTTTAAGGGAGATGAGAAAATGCCAAATTCCAAGCTTCACTTGATTGCTAATGAGAATAGTGGGGGTTTCCCAAGTGGCAAAAAAGGTGGGAATCATGGTGTAGATGTAGATCAAAAGAGTGAAATGCGAGTTCCGAGTCTTGTGGCTAGGTTGATGGGTCTAGAAACTATTCCGGCGGCACAGCGAGATAAGTCCAAGAAATCCTTGTGTGCTGATGGGAAGAAGGAGTATTTAGGTGAACATTGTGAGTTGGATAGGCAAGGCATGGATTTGGAAATGGGAGTTGCAAAGCATGATTCAAGGCCTCAGAAGCTTCAGAAAACCACAGCGTATGAGAGAAGGGCGGTGACTAGGTTTGGAGCTGAGGCCCTGCAAATTAAGAGTGTTTTGTCCCGAGCAAGAAAGTATAATCACCACCATCATCATCACCCAAAGCTTGCTTCTTCATTGAAGAGCCCGAGAATTCCTTCGGGAAAGGGTGGTTCTCGAAGCTCTAGGTTAATAGGCGCAGCTGCTAAAATTTTGGAACCTGGACTGCATAGCAGAAGTAGAGCTGAGTGTTCTATTACATATCCTGCTTCCATGTATCCTGCTAAGACTGACATCGTGACAAATGGTGTTGAAGATCGGTCAGCAATTGTGCAAAATCAATGTTGTTATGATGCCTGTTCAACCAAGCAATTGATGGGGCAGACCTCTTGCAAAAATTGTGGTAATTTGCTTGATGTTGTTGACTGCAAGTTTGAGGTTGGGGGTGTTCCTCCACCTGTTGTTTCAGATGTGATCACTGCTACTTCTATGGTATCATTGGAGAAGAAGGGAAAGTCATTCGCTCCCTCTCCTGGGCAAGAAAGGGATGTAGTTCTTCTGAGATGTCAGGAAAAGCACATATCTCTTGTTACTGAACAAGAAGGAAAAAATAATTCACATCAGTCATGGAGTGAACCCACTGCCAGAAGAATGCCAATGCCCCATGAAACTCCAGCTAAATGGAATTCGTCATGCCAACCATCAAAGGCCCTAGAGGGTGATGCATCTTCTTCTGCCTTGAAACACAAAACTCAAACACAAGAACATATGTTAAGCCGTGAAAGATATTCATCTGGGTCTACAATGAGTGATATGCAAGTAAAAAGGGTATCGTCATCTATGAGCACTATGAATGGGAGTAAAGACTTTGTTGCTATGAACAGAAGCCTAAGTGGTCGAACAAGGACGAGGTCACCTACCAAAGTGGATAGTTCTAAATTTGACCTAGAGAAAAAACCTTGTAATAGACAGCATAATTCCTTATGTCATGTAAGAACATTAGAGAGAAAAAGAAGGATACCGAATGTCACACAACTAGAAGGCACGGTTTCTGTTTATTCAGTTGGTGCAAAACAGAGAAATCTTCATTCTGCTGGGCTAGGTGGCAAAAGGAGGGACCTGAATGCTTCCTCCTTGAACAATTCTATTGTGAAAAATAAACAAGTTTGTCTTGGAGAAAAGGATAAGATTAATGACAATAAGATCAATGATGTGGTGTCGTTTGCATTTAGTTCTCCCCTGAAGCAAAAGATAGGAATTCGTATCGAGAAGGAAGAGGCAAGTAGTGACAATGAGAGTATGCCGTCTTTCCAAAGGCCTTTGACATTGAGAGATGCTTTAGGTGCCATTCTAGAACAAAAATTGAAGGAATTAACCTCTCAAAGAGAAGAGGAGTTGGCTACAGGTGCTCTGCCTAAAAAATCAAGTGCCATGATTCTTCAAGAGCTGATATCTGCTCTAAGTTCAGAGCATCTGATATGTCATGATGGTCGTCACATGTTTAATGAAAATGCTGGTTTTCATTATGCGGCAAAACAAGAAAGGTTATTAGGAACCTCTTGCAATGCTAATCATCTGAGTCCTGGATCTGTTTTGGAAGCTTCCTTTTCTTCCAGTAGTCTTGATGAAAGCTCAGGGCATGGTTTTCACCCTGACTCATTGAATTACTCTTGTGGTCAACTGGAACAATTGGAACATGATACCAAACTTTCAGATTCTGCAACATCCTTTAACAAGGAGAGGATAGGTGAGAAACTGAGTGATCTTGTCAACCAAATTCCCAGGGCATTAGAGATTTTATGCTCTTTTGGGACAGAATTGACAAGAATCAAGCTCAACCATATGAAGGATATTCTCTTGCATGCTGAGTTACTGCTTGGAATCACAGCAGTCCGCAGAGAGGATGAAGGGCCACAACTTCTAATTTACCGGTTTCTTGTTGATGATCTGGATGCGATGGTGGGTGAAGCTATGTGGACAGATTTTAATGGTTTTGTTTTGGGTTGTGAGGATTCTAGACAGAGAAAGGAGCTGAAGGGGTTTCTCCTTGATTGTGTTATAGAATATATAGAATCAAACTGCTGCCAATATTTTAACTGTGGATTCAAGGCATGGACAAAGCTGCCATTATGCATGAAGGCTGAGATGTTAGCTCAAGAGGTCAAGAGGGAGATCAACAAGTGGTTATCTATGGTTGGGATGGTACCTGATGAAATAATAGAATGGGAAATGAGCCACTCCTCTGGGAAATGGACTGACTTTGATATTGAAGCATTTGAAACAGGTGTTGATATAGATGGGGATTTACTTCAAACGTTGGTTGATGAAGTTGTTGAAGAAATTGTAGTAGGTTGCAAGCAGGGCTCCATTTCCTTCTAA 2853 0.4199 MNDSTVKNLAITEKKVQHKPGGCVGIFFQLIDWKRKLSKKKLFSKKLLPPARAKKFKGDEKMPNSKLHLIANENSGGFPSGKKGGNHGVDVDQKSEMRVPSLVARLMGLETIPAAQRDKSKKSLCADGKKEYLGEHCELDRQGMDLEMGVAKHDSRPQKLQKTTAYERRAVTRFGAEALQIKSVLSRARKYNHHHHHHPKLASSLKSPRIPSGKGGSRSSRLIGAAAKILEPGLHSRSRAECSITYPASMYPAKTDIVTNGVEDRSAIVQNQCCYDACSTKQLMGQTSCKNCGNLLDVVDCKFEVGGVPPPVVSDVITATSMVSLEKKGKSFAPSPGQERDVVLLRCQEKHISLVTEQEGKNNSHQSWSEPTARRMPMPHETPAKWNSSCQPSKALEGDASSSALKHKTQTQEHMLSRERYSSGSTMSDMQVKRVSSSMSTMNGSKDFVAMNRSLSGRTRTRSPTKVDSSKFDLEKKPCNRQHNSLCHVRTLERKRRIPNVTQLEGTVSVYSVGAKQRNLHSAGLGGKRRDLNASSLNNSIVKNKQVCLGEKDKINDNKINDVVSFAFSSPLKQKIGIRIEKEEASSDNESMPSFQRPLTLRDALGAILEQKLKELTSQREEELATGALPKKSSAMILQELISALSSEHLICHDGRHMFNENAGFHYAAKQERLLGTSCNANHLSPGSVLEASFSSSSLDESSGHGFHPDSLNYSCGQLEQLEHDTKLSDSATSFNKERIGEKLSDLVNQIPRALEILCSFGTELTRIKLNHMKDILLHAELLLGITAVRREDEGPQLLIYRFLVDDLDAMVGEAMWTDFNGFVLGCEDSRQRKELKGFLLDCVIEYIESNCCQYFNCGFKAWTKLPLCMKAEMLAQEVKREINKWLSMVGMVPDEIIEWEMSHSSGKWTDFDIEAFETGVDIDGDLLQTLVDEVVEEIVVGCKQGSISF 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02497 950 MobiDBLite consensus disorder prediction 356 429 - -
Cca07g02497 950 Pfam DUF761-associated sequence motif 92 118 IPR032795 -
Cca07g02497 950 Pfam Domain of unknown function (DUF4378) 771 934 IPR025486 -
Cca07g02497 950 MobiDBLite consensus disorder prediction 357 371 - -
Cca07g02497 950 MobiDBLite consensus disorder prediction 384 429 - -
Cca07g02497 950 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 9 940 - -
Cca07g02497 950 MobiDBLite consensus disorder prediction 189 219 - -
Cca07g02497 950 MobiDBLite consensus disorder prediction 189 203 - -
Cca07g02497 950 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 9 940 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02497 Cca-Chr7 53766391 53773640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02497 1 939 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 31.063 4.56e-85 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02497 - - gmx:100813026 1476.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02497 07 53766391 53773640 Cca07g02497 07 53766391 53773640 ECH