Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02461 atgcgggaGATTGCTGAGGCTTTTTTGGAAAAACCTGTGAAGAATGCTGTTGTTACTGTGCCTGCTTATTTCAATGACTCTCAGCGTAAAGCCACCATGGATGCTGGTGCCATTGCTGGCCTCAATGTTATACGGATAATCAGTGAACCCACTGCTGCTGCTATTGCATATGGCCTTGACAAGAGAACTAATTGTGTTGGAGAGCGAAACATTTTCATCTTTGACTTAGGTGGTGGTACTTTTGATGTGTCACTCCTCACAATCAAGGATAAGGTCTTCCAGGTTAAGGCCACTGCTGGAAACACTCATCTTGGAGGAGAGGACATCGACAACAGAATGGTGAACTATTTTGTAGAAGAGATCAAAAGGAAAAACAAAGTGGACATTAGTGGCAATCCTAGGGCTCTAAGGAGGTTGAGAACTGCATGTGAGAGGGCAAAAAGGACACTCTCTTGTGTTGTTACCACCAAAGTTGATGTTGATGCTATATTTCAAGGCATAGACTTCAACTCTTCAATCAATCGTGCAAGGTTTGAGGAAATTAATATGGAGCTGTTTGAAGAGTGCATTGAGACAGTAGAGAAGTGTCTTACTGATGCTAAGATGGACAAAAGCAGTGTGCATGATGTTGTCCTTGTTGGTGGCTCTTCTAGAATTCCCAAAGTGCAGCAGTTATTGCAGGCTTTCTTCAATGGTAAAGATTTGTGCAAGAGTATTAACCCTGATGAGGCTGTTGCTTATGGCGCAGCTGTGCAAGCTGCATTGTTGAGTAAAGGCTTTAAGAATGTTCCAGATTTCAGTATTACTATGATCCTGAAGGGGAGTATTATCGAACACAAAAACAGGTTCTTGAAACTTTTGAGATGCTTGGAGTCGTTGTGTTGGACACTAATTAGATCGATAGGTAATTAA 912 0.4145 MREIAEAFLEKPVKNAVVTVPAYFNDSQRKATMDAGAIAGLNVIRIISEPTAAAIAYGLDKRTNCVGERNIFIFDLGGGTFDVSLLTIKDKVFQVKATAGNTHLGGEDIDNRMVNYFVEEIKRKNKVDISGNPRALRRLRTACERAKRTLSCVVTTKVDVDAIFQGIDFNSSINRARFEEINMELFEECIETVEKCLTDAKMDKSSVHDVVLVGGSSRIPKVQQLLQAFFNGKDLCKSINPDEAVAYGAAVQAALLSKGFKNVPDFSITMILKGSIIEHKNRFLKLLRCLESLCWTLIRSIGN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02461 303 SUPERFAMILY Actin-like ATPase domain 1 61 IPR043129 -
Cca07g02461 303 PANTHER HEAT SHOCK PROTEIN 70KDA 1 270 IPR013126 GO:0005524|GO:0140662
Cca07g02461 303 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 270 - -
Cca07g02461 303 ProSitePatterns Heat shock hsp70 proteins family signature 3. 210 224 IPR018181 -
Cca07g02461 303 Gene3D Actin; Chain A, domain 4 105 188 - -
Cca07g02461 303 SUPERFAMILY Actin-like ATPase domain 68 257 IPR043129 -
Cca07g02461 303 Pfam Hsp70 protein 1 269 IPR013126 GO:0005524|GO:0140662
Cca07g02461 303 Gene3D - 1 254 - -
Cca07g02461 303 PRINTS 70kDa heat shock protein signature 239 259 - -
Cca07g02461 303 PRINTS 70kDa heat shock protein signature 16 36 - -
Cca07g02461 303 PRINTS 70kDa heat shock protein signature 79 89 - -
Cca07g02461 303 PRINTS 70kDa heat shock protein signature 207 223 - -
Cca07g02461 303 ProSitePatterns Heat shock hsp70 proteins family signature 2. 73 86 IPR018181 -
Cca07g02461 303 Gene3D - 62 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02461 Cca-Chr7 53309840 53310751 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02461 1 266 Calmodulin-binding Proteins AT3G12580 77.528 3.76e-151 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02461 K03283 - gmx:102667572 454.907