Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02459 ATGACTAGCAATGGAAGATATCGAAGAAAGATGAACGCAGAAGAAATTGCTGAGATGACAAAAGTGACGGTGAAAAAAATAGAGTATCTACATGCAAATAGACGTCTGGGCCCTAACACTGTAGTTTCTTATCACGATATGAGCTCACCTGGCTAtggctggctgcttcctggctgggtggcCGAGGAACGCTGTGTAGAGAGCGGCAGGATTTATAGAGTGAAGCGGGTTGTAGAAGAGATCAAAAGGAAAAACAAAGTGGACATTAGTGGCAATCCTAGGGCTCTAAGGAGGTTGAGAACTGCATGTGAGAGGGCAAAAAGGACACTCTCTTGTGTTGTTACCACCAAAGTTGATGTTGATGCTATATTTCAAGGCATAGACTTCAACTCTTCAATCAATCGTGCAAGGTTTGAGGAAATTAATATGGAGCTGTTTGAAGAGTGCATTGAGACAGTAGAGAAGTGTCTTACTGATGCTAAGATGGACAAAAGCAGTGTGCATGATGTTGTCCTTGTTGGTGGCTCTTCTAGAATTCCCAAAGTGCAGCAGTTATTGCAGGCTTTCTTCAATGGTAAAGATTTGTGCAAGAGTATTAACCCTGATGAGGCTGTTGCTTATGGCGCAGCTGTGGCCCACCCCTAG 645 0.4124 MTSNGRYRRKMNAEEIAEMTKVTVKKIEYLHANRRLGPNTVVSYHDMSSPGYGWLLPGWVAEERCVESGRIYRVKRVVEEIKRKNKVDISGNPRALRRLRTACERAKRTLSCVVTTKVDVDAIFQGIDFNSSINRARFEEINMELFEECIETVEKCLTDAKMDKSSVHDVVLVGGSSRIPKVQQLLQAFFNGKDLCKSINPDEAVAYGAAVAHP 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02459 214 PANTHER SHOCK COGNATE 70 KDA PROTEIN 2, PUTATIVE, EXPRESSED-RELATED 74 211 - -
Cca07g02459 214 Gene3D - 149 196 - -
Cca07g02459 214 Gene3D Actin; Chain A, domain 4 74 148 - -
Cca07g02459 214 PRINTS 70kDa heat shock protein signature 167 183 - -
Cca07g02459 214 PRINTS 70kDa heat shock protein signature 199 214 - -
Cca07g02459 214 Pfam Hsp70 protein 76 211 IPR013126 GO:0005524|GO:0140662
Cca07g02459 214 ProSitePatterns Heat shock hsp70 proteins family signature 3. 170 184 IPR018181 -
Cca07g02459 214 PANTHER HEAT SHOCK PROTEIN 70KDA 74 211 IPR013126 GO:0005524|GO:0140662
Cca07g02459 214 SUPERFAMILY Actin-like ATPase domain 75 211 IPR043129 -
Cca07g02459 214 Gene3D - 197 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02459 Cca-Chr7 53305600 53306384 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02459 74 211 Calmodulin-binding Proteins AT3G12580 76.812 4.28e-72 229