Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02451 ATGTACATACTTGGTTCAAACAAAAATAAAGTTGCAAAAGTGCATCATGTGGACGACGATTCATTACTACCTCATCTGACATTTCAAGGCCAAAGACAGAGCTTTTCACTTTTCAAGAATCAGGATTGTGACGCTATTCATATTTCAAGGACTCTGCTCATGGGAGAAAAAACAATACCTGGGGAACCACAGACCCCCTCTCTCGCTCTCACGCTACAGCGGCGTGCACGTGCTGGAATTCCTTCGGTACCTCGTCCACCCGCGGCCTCCGCTGTCCAGCCGAGCTCCTCCGCCGTCCGCACCTCCGCCGTCCAACCACCGCCTCAAAGGTTGATCGGTGATGCTGCTAAAAATCAAGCTGCCACTAATCCAGAGAACACCATCTTCGATGCCAAGAGGTTGATTGGTAGGAAATATAGCGAGCAAAATGTTCAAAAAGATAAAATGTTGTGGCCATTTAAGGTCGTTGCTGGTACCAATGACAAACCAATGATCGTGGTTAAATACAAGGGTCAGGAGAAGCAACTTTGTGCTGAGGAAGTATCATCCATGGTCCTTGTTAAGATGCGGGAGATTGCTGAGGCTTTTTTGGAAAAACCTGTGAAGAATGCTGTTGTTACTGTGCCTGCTTATTTCAATGACTCTCAGCGTAAAGCCACCATGGATGCTGGTGCCATTGCTGGCCTCAATGTTATACGGATAATCAGTGAACCCACTGCTGCTGCTATTGCATATGGCCTTGACAAGAGAACTAATTGTGTTGGAGAGCGAAACATTTTCATCTTTGACTTAGGTGGTGGTACTTTTGATGTGTCACTCCTCACAATCAAGGATAAGGTCTTCCAGGTTAAGGCCACTGCTGGAAACACTCATCTTGGAGGAGAGGACATCGACAACAGAATGGTGAACTATTTTGTAGAAGAGATCAAAAGGAAAAACAAAAGAAGTGTCTTACTGATGCTAAGATGGACAAAAGCA 978 0.455 MYILGSNKNKVAKVHHVDDDSLLPHLTFQGQRQSFSLFKNQDCDAIHISRTLLMGEKTIPGEPQTPSLALTLQRRARAGIPSVPRPPAASAVQPSSSAVRTSAVQPPPQRLIGDAAKNQAATNPENTIFDAKRLIGRKYSEQNVQKDKMLWPFKVVAGTNDKPMIVVKYKGQEKQLCAEEVSSMVLVKMREIAEAFLEKPVKNAVVTVPAYFNDSQRKATMDAGAIAGLNVIRIISEPTAAAIAYGLDKRTNCVGERNIFIFDLGGGTFDVSLLTIKDKVFQVKATAGNTHLGGEDIDNRMVNYFVEEIKRKNKRSVLLMLRWTKA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02451 326 MobiDBLite consensus disorder prediction 89 103 - -
Cca07g02451 326 Pfam Hsp70 protein 109 314 IPR013126 GO:0005524|GO:0140662
Cca07g02451 326 Gene3D - 129 184 - -
Cca07g02451 326 SUPERFAMILY Actin-like ATPase domain 95 249 IPR043129 -
Cca07g02451 326 SUPERFAMILY Actin-like ATPase domain 256 316 IPR043129 -
Cca07g02451 326 Gene3D - 108 249 - -
Cca07g02451 326 Gene3D - 250 292 - -
Cca07g02451 326 PRINTS 70kDa heat shock protein signature 116 124 - -
Cca07g02451 326 PRINTS 70kDa heat shock protein signature 267 277 - -
Cca07g02451 326 PRINTS 70kDa heat shock protein signature 204 224 - -
Cca07g02451 326 Gene3D Actin; Chain A, domain 4 293 315 - -
Cca07g02451 326 ProSitePatterns Heat shock hsp70 proteins family signature 2. 261 274 IPR018181 -
Cca07g02451 326 PANTHER HEAT SHOCK 70 KDA PROTEIN 108 317 - -
Cca07g02451 326 MobiDBLite consensus disorder prediction 80 103 - -
Cca07g02451 326 PANTHER HEAT SHOCK PROTEIN 70KDA 108 317 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02451 Cca-Chr7 53214326 53218913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02451 109 317 Calmodulin-binding Proteins AT3G12580 75.598 8.73e-113 339