Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02450 ATGATGTGGCCATTCAATGTTGTTGCTGATATCAATGACAAACCTATGATCATCATTAAGTACAAAGGGCAAGAGAAGCTCCTTTCCGCTGAGGAAATATCATCTATGATCCTCATGAAAATGAAGGAGATTGCAGAAGCATATTTGGAAGCACAGGTAAAAGATGTTGTTGTTACTGTGCCGGCTTATTTCAATGACTCTCAGCGAAAAGCCACCATAGACGCTGCTTTAATTGCTGGCCTCAATGTTATGCGGATAATCAATGAACCTACTGCTGCAGCTATTGCATATGGCATTGACAAGAGAACTAACTGTGTTGGAGAGCGGAATATTTTCGTTTTTGACCTTGGTGGTGGTACTTTTGATGTGTCTCTTCTCACAATTAGGGATAAGGTCTTCCAAGTTAAGGCCTCTGCTGGAAACACTCACCTAGGGGGAGAGGACTTTGACAACAGAATGGTGAATTACTTTGTAGAGGAGATCAAAAGGAAGAACAAAGTGGACATTAGTGGGAACTTAAGAGCGCTAAGGATGTTGAGAACTGCATGTGAAAGGGCAAAACGGACACTCTCCTTTGCCGTTAGTACCTGTGTTGAGGTTGATGCTTTGTTCCAAGGCATTGACTTATGTTCTTCAATCACACGTGCAAAGTTTGAAGAAATTAATATGGAGCTCTTTGTGGAGTGCATGGAGACTGTAGATAGGTGTCTTAGTGATGCTAAGATGGAGAAGAGCAGTGTGCATGATGTTGTCCTTGTTGGTTGGTCTTCTAGGATTCCCAAAGTGCAACAACTCTTGCAAGACTACTTCAATGGGAAGGATCTTTGCAAGAGTATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTGCAAGCTGCTTTGTTGAGTGAAGGATTTAAGAATGTTCCTGATTTGGTTCTGTTGGATGTTACACCTCTGTCACTTGGTATAGCCGTAAAAGGAGATCTCATGAGTGTTGTGATTCCTAGGAATACTCCTATTCCTGTACAGAAGAAACAAATATACGGAACATTCAAAGATGACCTAACTTCTGTTCAGATAAATGTGTATGAGGGTGAGAGAACAAAAGCCAGTGATAACAATTTGCTTGGTTTTTTTAGTCTTTCCGGTTTTCCTCCTGCTCCTAAGTATCATCCTTTTGATATATGCTTTGATATAGATGTCAATGGTATTTTGTCAGTTTCTGCAGTGGAAACAGTCACTGGCTATAAGAATGAGATTACCATAATCAATGATCAAGGAAGATTGTCAGCAGAAGAAATTAAACGAATGATACAAGAAGCTGAGACTTTCCAGGCTGAAGATAAGAAGTTCCATAGAAAAGCTAATGCAATGAATGCTTTGGATGCTTACGTTTACAAGATGAAGAGTTTTTTAAAAAAGGAAGATATCAAGTTAAAACTTTTCTCACAGGAAATGGAAGAGATTAGTTCTGAAATTACTAAGGCCATGAATTTTCTTGATGGTAATAATCTGCATGATGATGGAGATGTGTTTGAAGATTATCTGAAAGAGCTTGCTAACCTTTTTGAACCCATCATGGGCAAGTTTGGTTAA 1581 0.3966 MMWPFNVVADINDKPMIIIKYKGQEKLLSAEEISSMILMKMKEIAEAYLEAQVKDVVVTVPAYFNDSQRKATIDAALIAGLNVMRIINEPTAAAIAYGIDKRTNCVGERNIFVFDLGGGTFDVSLLTIRDKVFQVKASAGNTHLGGEDFDNRMVNYFVEEIKRKNKVDISGNLRALRMLRTACERAKRTLSFAVSTCVEVDALFQGIDLCSSITRAKFEEINMELFVECMETVDRCLSDAKMEKSSVHDVVLVGWSSRIPKVQQLLQDYFNGKDLCKSINPDEAVAYGAAVQAALLSEGFKNVPDLVLLDVTPLSLGIAVKGDLMSVVIPRNTPIPVQKKQIYGTFKDDLTSVQINVYEGERTKASDNNLLGFFSLSGFPPAPKYHPFDICFDIDVNGILSVSAVETVTGYKNEITIINDQGRLSAEEIKRMIQEAETFQAEDKKFHRKANAMNALDAYVYKMKSFLKKEDIKLKLFSQEMEEISSEITKAMNFLDGNNLHDDGDVFEDYLKELANLFEPIMGKFG 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02450 526 PANTHER HEAT SHOCK PROTEIN 70KDA 1 524 IPR013126 GO:0005524|GO:0140662
Cca07g02450 526 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 301 453 IPR029047 -
Cca07g02450 526 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 524 - -
Cca07g02450 526 Pfam Hsp70 protein 2 523 IPR013126 GO:0005524|GO:0140662
Cca07g02450 526 SUPERFAMILY Actin-like ATPase domain 2 101 IPR043129 -
Cca07g02450 526 ProSitePatterns Heat shock hsp70 proteins family signature 2. 113 126 IPR018181 -
Cca07g02450 526 Gene3D - 37 294 - -
Cca07g02450 526 Gene3D - 102 276 - -
Cca07g02450 526 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 302 457 IPR029047 -
Cca07g02450 526 Gene3D - 2 36 - -
Cca07g02450 526 Gene3D Actin; Chain A, domain 4 145 228 - -
Cca07g02450 526 SUPERFAMILY Actin-like ATPase domain 108 297 IPR043129 -
Cca07g02450 526 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 452 525 IPR029048 -
Cca07g02450 526 Gene3D - 454 525 IPR029048 -
Cca07g02450 526 PRINTS 70kDa heat shock protein signature 56 76 - -
Cca07g02450 526 PRINTS 70kDa heat shock protein signature 119 129 - -
Cca07g02450 526 PRINTS 70kDa heat shock protein signature 247 263 - -
Cca07g02450 526 PRINTS 70kDa heat shock protein signature 279 299 - -
Cca07g02450 526 PRINTS 70kDa heat shock protein signature 305 324 - -
Cca07g02450 526 PRINTS 70kDa heat shock protein signature 385 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02450 Cca-Chr7 53203133 53204713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02450 3 525 Calmodulin-binding Proteins AT3G12580 64.190 0.0 703