Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02445 ATGGAAGCAACTTATATTCAATACGGTCATCTTGTTCTCTCAGACATTTCAAGGCCAAAGAAAGAGCTTTTCACTTTTCAAGATGGTTTATTTCAGGGCGTAGACTTTTGCTCTTCAATCACTCGTGCAAGGTTTGAGGAACTGAATATGGAACTCTTTGAAGAGTGTATGGAGACAATAGAAAGGTGTCTTAGTGATGCTAAGATGGAGAAGAGCTGTGTACATGATGTGGTCCTTGTTGGTGGCTCTTCTAGGATTCCCAAAGTGCAGCAGTTATTGCAGGACTTTTTCAATGGAAAGGATCTTTGCAAGAGCATCAACCCTGACGAGGCTGTTGCTTATGGCGCAGCTGTGCAAGCTGCTTTGTTGAGTAAAGACATTAAGAATGTTCCAGATTTGGTGCTGTTGGATGTTACACCGTTGTCACTTGGTGTGTTTGTCCAAGGAGATTTAATGAGTGTGGTGATTCCTAGAAATACTACCATTCCTGTAAAGAAGACACAAGAATATTGTACAGCTGATGATAACCAATCATCTGTTGCTATTAAGGTTTACGAGGGCGAGAGAACAAGAGCCAGTGATAACAATTTGTTGGGTTTCTTTACTCTTTCTAATCTTCCACCTGCTCCTCGTGGCCTTCCTTTGTTTGAATGCTTTACTATAGATGAAAATGGCATATTGTCTGTTTCTGCTGAGGAGAAAACCACTGGTAATAAGAATAAAATTACCATAACCAGTGATAAAGACAGATTGTCAACCAAAGAAATTGAAAGAATGATACAAGAGGCAGAGATTTATAAGGCCGAAGATAACAAGTTTCTTAAGAAGGCCAAAACAAGGAATGATTTGGATTATTATGTTTACAAAATAAGGAATGTCTTAAAGAAGGAGGATATAAACTCAATGCTTTGCTCACAAGAAAAAGAGGATATCAGTTCTGCTATAAATAAGGCTACTGATTTGCTTGATGAGAACTATGAGCAAGATGATATATCTATGTTCGAGGATTGTTTGAAAGAGCTTGAGAGCTTCTTTGGAAGCCTCAAGGCCATGGGCTAG 1059 0.39 MEATYIQYGHLVLSDISRPKKELFTFQDGLFQGVDFCSSITRARFEELNMELFEECMETIERCLSDAKMEKSCVHDVVLVGGSSRIPKVQQLLQDFFNGKDLCKSINPDEAVAYGAAVQAALLSKDIKNVPDLVLLDVTPLSLGVFVQGDLMSVVIPRNTTIPVKKTQEYCTADDNQSSVAIKVYEGERTRASDNNLLGFFTLSNLPPAPRGLPLFECFTIDENGILSVSAEEKTTGNKNKITITSDKDRLSTKEIERMIQEAEIYKAEDNKFLKKAKTRNDLDYYVYKIRNVLKKEDINSMLCSQEKEDISSAINKATDLLDENYEQDDISMFEDCLKELESFFGSLKAMG 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02445 352 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 279 346 IPR029048 -
Cca07g02445 352 ProSitePatterns Heat shock hsp70 proteins family signature 3. 77 91 IPR018181 -
Cca07g02445 352 Pfam Hsp70 protein 31 344 IPR013126 GO:0005524|GO:0140662
Cca07g02445 352 PRINTS 70kDa heat shock protein signature 212 228 - -
Cca07g02445 352 PRINTS 70kDa heat shock protein signature 132 151 - -
Cca07g02445 352 PRINTS 70kDa heat shock protein signature 106 126 - -
Cca07g02445 352 PRINTS 70kDa heat shock protein signature 74 90 - -
Cca07g02445 352 Gene3D Actin; Chain A, domain 4 28 55 - -
Cca07g02445 352 PANTHER HEAT SHOCK 70 KDA PROTEIN 28 348 - -
Cca07g02445 352 PANTHER HEAT SHOCK PROTEIN 70KDA 28 348 IPR013126 GO:0005524|GO:0140662
Cca07g02445 352 SUPERFAMILY Actin-like ATPase domain 27 124 IPR043129 -
Cca07g02445 352 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 128 279 IPR029047 -
Cca07g02445 352 Gene3D - 56 103 - -
Cca07g02445 352 Gene3D - 104 121 - -
Cca07g02445 352 Gene3D - 280 348 IPR029048 -
Cca07g02445 352 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 129 284 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02445 Cca-Chr7 53152541 53155794 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02445 28 344 Calmodulin-binding Proteins AT3G12580 64.486 2.35e-138 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02445 K03283 - gmx:102667578 494.967