Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02428 ATGATCTTTAGGATGCTTATCCTATCTGTGGCTTTTATGGTGACAAATTCAATAGCTCTCACAGAACAACAAACATACATAATACACATAGACAAGACCAAGATCGAAGCCTCAATTCATTCTCAAGACAGCTCAAAACCATGGGTTGAATCAATCATTGATTTCATTTCTCAAGCTTCAATGCAGGAAGAAGAAGAGATTTTAGCTCCTCGACTCCTTTATACCTATGAAAACAGCATGTATGGTTTTGCTGCTCAGCTTTCCAAGAAACACCTAGAATACTTGAACCAAGTGGATGGTTTCCTCTCAGCCATACCTGATGAACTATCAACTCTCCACACAACATACACTCCACATTTTCTTGGCCTGAGGAATGGAAAATCACTTTGGACTGCTTCTAACTTGGTCTCAGAAGTGATCATTGGGGTCCTTGATTCAGGAATATGGCCTGAACACATCAGTTTCCAAGATTCAGGTATGTCCCCAGTACCTTCTCATTGGAAAGGTGTTTGTGAGCAAGGCACCAAGTTCTCTTCCAAAAATTGCAACAAGAAGCTTATTGGTGCAAGAGCCTATTACAAGGGGTATGAAAACTATGCTGGAAAGATCAATGAAACAGTGGATTATGTTTCCCCAAGAGATTCCCAAGGGCATGGAACACACACTGCCTCAACTGCAGCTGGTGATGTGGTGAAAAATGCCAACCTTTTTGGCCAGGCTAAAGGCACAGCAAGTGGAATGAGGTACACCTCAAGAATTGCAGCTTACAAAGTATGCTGGCCTTCTGGTTGTACTAATTCCGATGTGTTAGCCGCCATGGATCAAGCGGTTTCTGATGGGGTTGATGTGTTGTCACTCTCTTTAGGTACTATTCCCAAGCCTTTTTACAATGACAGTATTGCAATAGCTTCATTTGGAGCAACCAAGAGAGGAGTTTTTGTTGCTTGCTCTGCAGGCAACTCGGGCCCCTTTCCATCTACAGTTGCAAATGGTGCTCCATGGATCATGACAGTTGCTGCTAGCTCCACTGACCGAACCTTTCCAACAAAGGTGAAGCTTGGCAATGGAAAAAGTTTCAAAGGGTCATCTTTATATCAAGGTAAGAATACAAACCAATTGCCCCTTGTCTATGGAAAATCAGCGGGTCCAAAAAGGGAAGCACAGTATTGCATTGAAGGCTCCCTTGATCCAAAGCTTGTGCATGGGAAAATAGTTGCTTCCACTTCATTAGGGGCTTTAGCAAGTAAGACTATTAGAAGCTACATTCAATCTGTTAAAAAATCAACAGCTTCAATTTCTTTTATTGGAACAAGGTTTGGTGACCCTGCACCAGTGATGGCAGCATTTTCTTCTAGAGGACCAAGCATAGTGGGACCAGATGTGATCAAGCCAGATGTGACTGCACCTGGCGTCAACATCTTGGCTGCTTGGCCTACCAATATTAGCCCAAGCTTTCTCAAGAGTGACAAAAGAAGAGTACTATTTAACATACTTTCAGGTACCTCAATGTCTTGTCCTCATGTTAGTGGCATAGCAGCACTGCTTAAGTCCTTGCACAAAGATTGGTCCCCAGCAGCTATCAAATCTGCTCTCATGACTACTGCCTACACATTGAACAACAAAGGAGCTCCAATTTCAGACATGGCCTCAAACAACTCACCATTTGCTAACCCCTTTGCATTTGGTTCAGGCCATGTTAACCCTATTGCTTTATTATCAAGAGGCAACTTTGTTTGTTCTAAGAAATCAGTTCTTCAAGCTGGTGACTTGAACTACCCTTCATTTGCTGTTCTATTTGGCAGAAGTGACTTAAATGCTAGTGTGACATACAAGAGGGTTGTCACAAATGTTGGAAAACCCCAAAGTGGTTATGCAGTTAAAGTGGAACAGCCAAATGGAGTTTCAGTTACAGTTGAACCAAGGAAATTGAAGTTTGGAAAACTGGGTCAGAAATTGAGTTACAAGGTGACATTTTTGGCAGTTGGCGGAGCAAGAGTTGGTGGTACCTCATCATTTGGGTCACTGATTTGGGTATCAGGTAGATACAAAGTTAGAAGTCCTATAGCAGTAACCTGGCAATAG 2082 0.4251 MIFRMLILSVAFMVTNSIALTEQQTYIIHIDKTKIEASIHSQDSSKPWVESIIDFISQASMQEEEEILAPRLLYTYENSMYGFAAQLSKKHLEYLNQVDGFLSAIPDELSTLHTTYTPHFLGLRNGKSLWTASNLVSEVIIGVLDSGIWPEHISFQDSGMSPVPSHWKGVCEQGTKFSSKNCNKKLIGARAYYKGYENYAGKINETVDYVSPRDSQGHGTHTASTAAGDVVKNANLFGQAKGTASGMRYTSRIAAYKVCWPSGCTNSDVLAAMDQAVSDGVDVLSLSLGTIPKPFYNDSIAIASFGATKRGVFVACSAGNSGPFPSTVANGAPWIMTVAASSTDRTFPTKVKLGNGKSFKGSSLYQGKNTNQLPLVYGKSAGPKREAQYCIEGSLDPKLVHGKIVASTSLGALASKTIRSYIQSVKKSTASISFIGTRFGDPAPVMAAFSSRGPSIVGPDVIKPDVTAPGVNILAAWPTNISPSFLKSDKRRVLFNILSGTSMSCPHVSGIAALLKSLHKDWSPAAIKSALMTTAYTLNNKGAPISDMASNNSPFANPFAFGSGHVNPIALLSRGNFVCSKKSVLQAGDLNYPSFAVLFGRSDLNASVTYKRVVTNVGKPQSGYAVKVEQPNGVSVTVEPRKLKFGKLGQKLSYKVTFLAVGGARVGGTSSFGSLIWVSGRYKVRSPIAVTWQ 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02428 693 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 405 569 - -
Cca07g02428 693 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 16 406 - -
Cca07g02428 693 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 569 693 - -
Cca07g02428 693 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 12 113 IPR037045 -
Cca07g02428 693 ProSitePatterns Serine proteases, subtilase family, serine active site. 500 510 IPR023828 -
Cca07g02428 693 Gene3D - 412 439 - -
Cca07g02428 693 Gene3D - 344 406 - -
Cca07g02428 693 ProSiteProfiles Serine proteases, subtilase domain profile. 115 572 - -
Cca07g02428 693 Gene3D Peptidase S8/S53 domain 139 343 IPR036852 GO:0004252|GO:0006508
Cca07g02428 693 Gene3D Peptidase S8/S53 domain 440 573 IPR036852 GO:0004252|GO:0006508
Cca07g02428 693 CDD Peptidases_S8_3 111 536 IPR034197 -
Cca07g02428 693 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 405 569 IPR045051 -
Cca07g02428 693 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 406 IPR045051 -
Cca07g02428 693 Gene3D - 586 692 - -
Cca07g02428 693 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Cca07g02428 693 PRINTS Subtilisin serine protease family (S8) signature 499 515 IPR015500 -
Cca07g02428 693 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Cca07g02428 693 CDD PA_subtilisin_like 351 405 - -
Cca07g02428 693 Pfam Fibronectin type-III domain 589 690 IPR041469 -
Cca07g02428 693 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 569 693 IPR045051 -
Cca07g02428 693 Pfam Subtilase family 137 542 IPR000209 GO:0006508|GO:0008236
Cca07g02428 693 Pfam Peptidase inhibitor I9 25 110 IPR010259 -
Cca07g02428 693 SUPERFAMILY Subtilisin-like 112 573 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02428 Cca-Chr7 53017116 53019466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02428 21 693 Subtilisin-like Serine Gene Family AT1G01900 49.533 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02428 - - gmx:100790006 1191.41