Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02414 ATGGCAGATGCGATAGTGGTGTTCCTGATAGAGAAGTTGACGAGGCTGCTAGAGAAGGAAGCGAAGCTGCTGGGCGGGTTGCAGGATGAAGTGACGTGGTTGCGCGGGGAGCTAAAGTTCATGATCCTGTTCCTCAACAACTCCCAAGGGAAGCGGAAAGAGCACGACCTGGTGGCGGAAGTGGTCAGCCAAATCAGAGACGTGGCCCACGAAGCGGAAGACGTCATCGACACTTACATCGCCCACATGATCAAACAGGGAAGGAGGACCATGGTGGAAAGAGCCGTTGTCCGCTCTGTACCCAACGCGCGCATGCTTCACGACGTGGCCGTCAAGATAGGGAGAATCAAAACCACCGTCGACAAGATCTTCGACAACCAAGAGAAATACGGGATTGAAGGTGGAAGGAGAGAAAGCGTAGAAGAAGCCGAGCGCATACGCAAGCGGAGGAGGGACGTGGAGGAAGAAGAGGTTGTGGGGTTTGAGCATGATTCCAGGTTTGTAATTGACCAACTTATGGCAAAGGGTTCACGCCTTGACGTTGTttccatcatcggcatgggtggcttaggaaaaaccacccttgccaagaaagtatactacgactacagggtcaagactatgtttccttgtcgcgcctggggttatgtctctaatgattACCGACCCAGGGAGTTTTTCCTAAGCCTGCTCAAGTGTTTGTTGTCCACCTCTAGATACAATGATTTGTTCTTCAAAGCTAAAGAGACAAGTGAGGAAGAGCTGATGATAAAGGTGCGAGAATGCTTGAACAAAAGCAAGTACTTGGTAGTGGTGGATGACATTTGGCAAACCCAAGTGTGGCATGAGATTAAGGGTGCATTTCCTGATGACTGCACCGGGAGCAGAATATTGATAACTAGTCGTTTGGCTGAGGTGGCTACGGCTTCTCGCACAAGTTCAGCTTCTCCCTACACCCTTCCCTTCCTCGACAAAGAACAAAGTTGGGAGCTACTTTCCAAGAAGGTGTTCCTCGGAGAAGAGTGTCCTCCCGATTTAGAGCCTCTGGGAAAAGAGATCGCTGAAAGCTGTGATGGCTTGCCACTTGCCATCATCGTCATGGCGGGGATTCTAGCAAAAAAGAACAAGTCACCGGGGGAATGGTCTAGAATCAAGGACCGTGTGAATTGGCATCTTGGGAGGGACAACACACTGAAGGATATACTGAAACTCAGCTACGACAACTTGCCTGCAAGGTTAAAGCCCTGCTTTCTATATTTTGGCATCTACCCTGAAGACTATGTGATATCGGTTAAACAATTGACTCGGTTGTGGATATCTGAAGGCTTCTTAATACAAGAAACTTCCACAACCCCAAACGTTCCAGAGCCAGAGTATATTGCGGAAGAGTACTTGGAAGAGCTAGTGGATCGAAGCTTGGTCCAAGTAGTAAGCAGGAGCAATGACGGGGCTGTCAAAACATGTCAGATTCACGATCTTCTTCGCGACCTTTGCATCTCCGAGAGCAGGGATGACAAGTTTTTTGAGGTTAGCGGAGCGATGGATTTTCAAGCCCACAACAGTTGTCCCCGTAGGTTGTCCCTCCACGGTACACTATTTCATTTCTCTTCAACCACTACCACCCTATCTGATTCCTGCATCTCGGGCACGCGTTCCCTCTTATGCTTCGGACAAGACGTATACAAGGTTAAAGCAAGCCACTGGACTTGGCTTCTCAAGAGCTTCAAGCTCGCTCGCGTGTTGGATCTAGGACGAATGAATGTTAACTCAATACCCGGTGATTTGGGGAATCTGACTCATCTAAGGTACTTGAGAATATGCTCATATAACCTCGAAACTATTCCGGCTTCTATCTGCAGGTTGTGGAATCTAGAAACCCTGGATTTAAGGGGTTCGCCTATAAAATCCTTTCCTAGTGAATTGTGGCAACTTAAGCATCTAAGGCATCTTCTAATGTTTGGACCCGTGGGGCTCCCAGAGATGCCATCGGATCAAAGTAAAACCATGCCGAATCTCCAAACCCTCTCTACCGTGGCTCTTCATCCACGCACAGCATCCTTGTTGGATACTCGTAGATTCCCCAGGTTGACAAAACTGGGTTTACAAAGTCGTGACAAGTGCAATGCTCATATCCAGTTACAGAGTCTCCACCGCCTAAGCCATCTCCACAAGCTAAAAGTGATTGGCACTACGGATATTCCGCAAAATGCGAACGTGTTTCCGTCAAACATCACCAAGATATCCCTCACAAAGTTTGGTTTCTTCAACTCCAGTGCTTTGCATACACTAGGAAAGCTTCCCAACCTCCAGGTTCTGAAGCTGTCATCGCAGACAAACGATACTAGTTTTGACCTGCACTGTGCCACGGGAGGGTTCCTACAGCTTCAAGTGTTTGAGATGTTGACCATCAAGGTCAAAAGGTGGAGAGTAGACAGAGGTTCCATGCCACGTCTTCGACGTTTAGTCCTCACAAGCTGCAAATCCTTGACTGAACTTCCAAAAGAACTCTGGTCTATGGCTACCTTGAGGGAAGTGCAGGTTTTGTGGCCCTGTACAGAATTGGCAAAAAGCCTCCAAAAGTTGGTGGTCAAGAATGGGTGTAAGCTCCTACTCTATCCCCTCCCTCTTGGCCATTGA 2637 0.463 MADAIVVFLIEKLTRLLEKEAKLLGGLQDEVTWLRGELKFMILFLNNSQGKRKEHDLVAEVVSQIRDVAHEAEDVIDTYIAHMIKQGRRTMVERAVVRSVPNARMLHDVAVKIGRIKTTVDKIFDNQEKYGIEGGRRESVEEAERIRKRRRDVEEEEVVGFEHDSRFVIDQLMAKGSRLDVVSIIGMGGLGKTTLAKKVYYDYRVKTMFPCRAWGYVSNDYRPREFFLSLLKCLLSTSRYNDLFFKAKETSEEELMIKVRECLNKSKYLVVVDDIWQTQVWHEIKGAFPDDCTGSRILITSRLAEVATASRTSSASPYTLPFLDKEQSWELLSKKVFLGEECPPDLEPLGKEIAESCDGLPLAIIVMAGILAKKNKSPGEWSRIKDRVNWHLGRDNTLKDILKLSYDNLPARLKPCFLYFGIYPEDYVISVKQLTRLWISEGFLIQETSTTPNVPEPEYIAEEYLEELVDRSLVQVVSRSNDGAVKTCQIHDLLRDLCISESRDDKFFEVSGAMDFQAHNSCPRRLSLHGTLFHFSSTTTTLSDSCISGTRSLLCFGQDVYKVKASHWTWLLKSFKLARVLDLGRMNVNSIPGDLGNLTHLRYLRICSYNLETIPASICRLWNLETLDLRGSPIKSFPSELWQLKHLRHLLMFGPVGLPEMPSDQSKTMPNLQTLSTVALHPRTASLLDTRRFPRLTKLGLQSRDKCNAHIQLQSLHRLSHLHKLKVIGTTDIPQNANVFPSNITKISLTKFGFFNSSALHTLGKLPNLQVLKLSSQTNDTSFDLHCATGGFLQLQVFEMLTIKVKRWRVDRGSMPRLRRLVLTSCKSLTELPKELWSMATLREVQVLWPCTELAKSLQKLVVKNGCKLLLYPLPLGH 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02414 878 Gene3D - 322 410 IPR042197 -
Cca07g02414 878 Gene3D Ribonuclease Inhibitor 559 876 IPR032675 -
Cca07g02414 878 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 420 IPR027417 -
Cca07g02414 878 PANTHER - 47 871 - -
Cca07g02414 878 Gene3D - 5 110 - -
Cca07g02414 878 Pfam Rx N-terminal domain 6 87 IPR041118 -
Cca07g02414 878 Pfam NB-ARC domain 167 407 IPR002182 GO:0043531
Cca07g02414 878 CDD RX-CC_like 2 125 IPR038005 -
Cca07g02414 878 Coils Coil 136 156 - -
Cca07g02414 878 PANTHER DISEASE RESISTANCE PROTEIN RP 47 871 IPR044974 GO:0006952
Cca07g02414 878 Coils Coil 10 30 - -
Cca07g02414 878 Gene3D - 411 500 IPR036388 -
Cca07g02414 878 Gene3D - 140 315 IPR027417 -
Cca07g02414 878 PRINTS Disease resistance protein signature 181 196 - -
Cca07g02414 878 PRINTS Disease resistance protein signature 262 276 - -
Cca07g02414 878 PRINTS Disease resistance protein signature 357 371 - -
Cca07g02414 878 PRINTS Disease resistance protein signature 813 829 - -
Cca07g02414 878 SUPERFAMILY L domain-like 490 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02414 Cca-Chr7 52863678 52867270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02414 173 676 WRKY Transcription Factor Family AT5G45050 22.263 2.70e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02414 - - gmx:100780593 969.148