Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02405 ATGGAGATAAGCTACGCATCGCCAAGTTTCTCCGACCTCTCCGCCGCCGCCAGCTCCTCCATGCCGTCGTCGGTCACCGCCGCCCGTCCCGTCAGGATCATCCCCCTGCAGCACCCGACCGCCACGTCCTCCTCGCCCACGCCGACTGAAGCCTTCGCGCGCTGGGCCGCGAGGCTCCGGCGAATGACGTGGCTCGAATGGATCGAGTTCTGCCTTCCGTGCGTCCGTTGGATTCGCACATACAAATGGCGCGAGTATTTGCAGGTCGATCTCATGGCCGGAATCACCGTCGGCGTCATGCTCGTTCCTCAGTCGATGTCGTATGCGAAATTGGCTGGACTTCAACCGATATATGGACTCTACTCTGCTTTTGTGCCGATATTTGTATATGCTATATTTGGGTCTTCTCGCCAGCTTGCAGTAGGCCCGGTGGCATTGGTTTCTCTCTTGGTCTCTAATGTGCTAGGTAGCATAGTTGATTCATCCAGTGAATTATACACACAGCTGGCAATATTACTGTCCCTTATGGTTGGGATAATGGAGTGCATAATGGGAATCTTGAGGCTTGGGTGGCTGCTTCGTTTCATTAGCCATTCAGTGATTTCTGGCTTTACAACTTCTTCAGCTATTGTCATCGGTTTATCTCAAGCGAAATACTTCTTGGGGTATGATATAGACAAAAGTAGCAAGATCATTCCGGTGGTTAAGAGTATAATAGCTGGTGCAGATAAGTTTTCATGGCCCCCTTTTTTGATGGGATGCATTATGCTTGCAATACTACTTGTTATGAAACACCTGGGAAAATCGAGGAAGTACTTGCGATTCATGAGAGCTGCAGGTCCTCTTACAGCAGTAGTTCTTGGAACAATTTTTTCAAAAATATTTCATCCATCATCAATTTCTTTGGTGGGAGATATACCTCAAGGCCTACCAAATTTTTCTGTGCCAAAAGCTTTTGAGTATGCACAGTCCTTAATTCCAACTGCTCTTCTCATAACTGGTGTGGCAATATTGGAATCTGTGGGAATTGCCAAGGCATTAGCAGCGAAGAATGGGTACGAGTTGGATTCAAACCAAGAGTTGTTTGGTCTTGGTGTTTCCAATGTTCTTGGTTCATTCTTTTCAGCATACCCCACTACAGGATCCTTTTCAAGGTCAGCTGTAAATCATGAAAGTGGTGCAAAATCTGGAGTATCTGGAATTGTTTCAGGAATTATAATTACGTGTGCACTTTTGTTTCTAACACCATTGTTTGAGTACATACCCCAGTGTGCTCTTGCTGCCATTGTGATCTCTGCTGTCATTGGCTTGGTAGATTATGAGGAGGCCATTTTTCTGTGGCGTGTAGATAAGAAAGATTTTCTTCTTTGGACCATTACCAGCATTACAACATTGTTCCTTGGTATTGAGATTGGTGTCCTTGTTGGGGTTGGGGTTTCACTTGCTTTTGTCATTCATGAGTCAGCCAATCCACATATCGCTGTTTTGGGTCGTTTGCCCGGGACAACTGTTTATAGAAATGTTAAACAGTATCCTGAAGCATATACATACAATGGAATTGTAATTGTTCGCGTCGATGCTCCAATTTATTTTGCAAACACAAGTTACATAAAGGACAGGTTGCGTGAATATGAAGTTCATGTTGATAGTTCTAAAAGCCGTGGACCTGAGGTTGAGAGAATTTATTTTGTGATTCTAGAGATGGCACCTGTGACCTATATAGATTCCAGTGCTGTTCAGGCTTTGAAAGATTTGTATCAGGAGTACAAATTACGGGATATTCAGATTGCAATATCCAATCCAAGCCCAGAAGTTCTGCGTACCTTGTCAAAATCGGGTCTGGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGACGCTGTTCAAGTTTGCTTGCAGCATGTTCAAAGCTTGAAAGTTGGATCAAACAGTTCACAATCAGAAGACAAACCAGGTTTCTTATCGCGGTTATTTAAAGAGAGAGGGGAGAACCTTTCGATTACTGACTTGGAGTCTGGTAATGGCAGGCCTCCACTCCCCAGGGACAGAGATTCCCAATTGGAGCCATTGTTGCCAAAAGAACGTTGA 2097 0.4492 MEISYASPSFSDLSAAASSSMPSSVTAARPVRIIPLQHPTATSSSPTPTEAFARWAARLRRMTWLEWIEFCLPCVRWIRTYKWREYLQVDLMAGITVGVMLVPQSMSYAKLAGLQPIYGLYSAFVPIFVYAIFGSSRQLAVGPVALVSLLVSNVLGSIVDSSSELYTQLAILLSLMVGIMECIMGILRLGWLLRFISHSVISGFTTSSAIVIGLSQAKYFLGYDIDKSSKIIPVVKSIIAGADKFSWPPFLMGCIMLAILLVMKHLGKSRKYLRFMRAAGPLTAVVLGTIFSKIFHPSSISLVGDIPQGLPNFSVPKAFEYAQSLIPTALLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVLGSFFSAYPTTGSFSRSAVNHESGAKSGVSGIVSGIIITCALLFLTPLFEYIPQCALAAIVISAVIGLVDYEEAIFLWRVDKKDFLLWTITSITTLFLGIEIGVLVGVGVSLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPEAYTYNGIVIVRVDAPIYFANTSYIKDRLREYEVHVDSSKSRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNPSPEVLRTLSKSGLVELIGKEWYFVRVHDAVQVCLQHVQSLKVGSNSSQSEDKPGFLSRLFKERGENLSITDLESGNGRPPLPRDRDSQLEPLLPKER 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02405 698 MobiDBLite consensus disorder prediction 668 698 - -
Cca07g02405 698 TIGRFAM sulP: sulfate permease 73 630 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cca07g02405 698 SUPERFAMILY SpoIIaa-like 512 634 IPR036513 -
Cca07g02405 698 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Cca07g02405 698 Gene3D STAS domain 490 638 IPR036513 -
Cca07g02405 698 Pfam Sulfate permease family 87 460 IPR011547 GO:0016021
Cca07g02405 698 MobiDBLite consensus disorder prediction 679 698 - -
Cca07g02405 698 CDD STAS_SulP_like_sulfate_transporter 511 627 - -
Cca07g02405 698 Pfam STAS domain 511 630 IPR002645 -
Cca07g02405 698 ProSiteProfiles STAS domain profile. 510 634 IPR002645 -
Cca07g02405 698 PANTHER SULFATE TRANSPORTER 4.1-RELATED 43 649 - -
Cca07g02405 698 PANTHER SULFATE TRANSPORTER 43 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02405 Cca-Chr7 52734411 52744650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02405 3 653 Inorganic Solute Cotransporters AT5G13550 72.012 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02405 K18059 - gmx:100775789 1169.45