Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02401 ATGGAGTCCAAACAAGAGCCACCAAGTGTAATTTTAAAATTGATGGGTCTTGATAAACCGCCTACTGAACATTCTGTTGGAGTTAAACAGAAAGTGCTCTCCGATAGCTACAGGCAGAAAATTGCTTCCATTGGTGTCATCAGAAGGAAGCGTTCGTCTCATCAGCGTGGAATGAATACTGATGAAAAAGAAGAATCTGAGGATGTTTCGAAAGTGGCCAAAGCACTAAGGCGAGGTGAGCACCATAACCCATCAATGGGAAATAGGAAAGAGAATCCTAGTTCTTGCAAAAATTCTCATTTTGGTGGGCAGAGTTCAAGGTCTTTCAGTAAAATTTCAAATATTTCTATGCAATCAGGAGATGTTGCAACCCGAGTTTTAAATACCACTTTAAGTGCATTTTTCAGAGGGAATGAAGCATTTTCCAATGAAACGCTGAAGCCTGCTTCAAATATTTCAGTTAATGAGATCCAATGCAATTCATCTTTCTTCTGTTCTGATGGTTCATATGTAGGCTCTGAAGCCAGGAACAAAACTTTGGAACAGAGGGATGTGACTGAAAACTTGCGAGAGCTTGGACGGTGTGGTCAAGACAGTACATGTAATCAGTTGGCTATGATTTCTGCACATGGAAATGGAGCAAGAAATTTGACTCATGGATTTGGTTATAGTAATGATATAATTGAAAGGAACATTAGACGTAAGGCTCGTCATAGAAATTTTCCAATACGTCATGTAGCTTCAGCACATGGAAGGAACATTAGTTGGGGAGCCATAAATCAGGATATCTTGTTTCAGAGATATTGGGGGTTGAGAAAGAATGCATCTGTAAATTGGTCATCCTGGAAGTCAAAGAATCAAAATATTAACCAGAAAGAATGTTTGGAAGATGTGAACCAAAGTTGCGGCCAAGAGAAATTATCTTCTTTTTCCTCTAATTTCAATAATAATCACACTGAAGAGAAGAGATGTTATGGGACTGATCTGTCTGATACGATAACTATGCCTCCTCAGTTGTCAAGTTCTAGTTTTTCTCCTGCCTTGCTAGATTGTCAGATATTGCAAGAGAGATGCTTAATGAATGATGAAGTGAAGAACAAAAAGTATGAAGACACTAATATTTCAAGACAAAATATCGTGTCTCCTGATTCATCAGTTGAATTCTTGGCATCTGATGCAAAGACTGAGGTTGTTGGCTGGTCACATTATAGTCCAACCAAGCATCAATCTAAATCAACACCCTTCATTTTGGCACAAGAAATTGATTCTTCGAGCCATACATCAGATGCTTCTAAGCAACAGGATCCATCAGACATTCAAGAAGATTCTGTTCATTCACTTTGCTCTGAGACTGACCCAGATTCTCTTGGTAGCTCTGAGCAGGCATATGGACCTAGTCCAATTTCTGTTTTAGACCCCTTATTATTTGGACAAGACATTCCATTCAGCTCTGAATGTGGCAGTCGTGTATATGATTCCTCTGAATTAGATGATGAAGAATTTGGTTTGAATATTTCAAGCGATGAAGATTGTGGGAATGCATCTGCGGTTGTTTCCAAAGAAAAGGAAGATATAGTAGGAATATTTAGAGATCAAGAAAGTAGGGATTTCTCGTATGTTGTTGAGGTCTTAACCGAGGCAGGTATTTGTAATAGGAGCTTGTTTACAGACTTCTCTACATGGCACTCTGCAGAATGTCCTATTAGCCCTGTTGTCTTTGAGATCCTGGAAAAGAAATTTGGCGAGCAAGAACTTTGGAAGAGATCTGAAAGGAAACTTCTCTTTGATCGCATTAATTTGGGGCTGCTTGAAATTTTTGAGCCGAATTTGTATATCCCAATGTGGGAAAAAACCATGTCAAGAAGATTGAATTCTGAACCTAGCCAGGACATGATTGAAGAGGAGATGTGGGGGTTGCTTGCAGCACAGGAAAAGAAATCTTGTAAAGAGTTAGCAGACAATATGGTTGGAGGGGAAATTAAGTGGATAGAACTAGGTGAAGATGTTGAAGATATTGTTATAGAGATTGTTAAGTTGTTTATAGAGGAGCTTGCAGATGAGATAGTAGTTAGCTTGGAAAATTTTTGA 2088 0.3884 MESKQEPPSVILKLMGLDKPPTEHSVGVKQKVLSDSYRQKIASIGVIRRKRSSHQRGMNTDEKEESEDVSKVAKALRRGEHHNPSMGNRKENPSSCKNSHFGGQSSRSFSKISNISMQSGDVATRVLNTTLSAFFRGNEAFSNETLKPASNISVNEIQCNSSFFCSDGSYVGSEARNKTLEQRDVTENLRELGRCGQDSTCNQLAMISAHGNGARNLTHGFGYSNDIIERNIRRKARHRNFPIRHVASAHGRNISWGAINQDILFQRYWGLRKNASVNWSSWKSKNQNINQKECLEDVNQSCGQEKLSSFSSNFNNNHTEEKRCYGTDLSDTITMPPQLSSSSFSPALLDCQILQERCLMNDEVKNKKYEDTNISRQNIVSPDSSVEFLASDAKTEVVGWSHYSPTKHQSKSTPFILAQEIDSSSHTSDASKQQDPSDIQEDSVHSLCSETDPDSLGSSEQAYGPSPISVLDPLLFGQDIPFSSECGSRVYDSSELDDEEFGLNISSDEDCGNASAVVSKEKEDIVGIFRDQESRDFSYVVEVLTEAGICNRSLFTDFSTWHSAECPISPVVFEILEKKFGEQELWKRSERKLLFDRINLGLLEIFEPNLYIPMWEKTMSRRLNSEPSQDMIEEEMWGLLAAQEKKSCKELADNMVGGEIKWIELGEDVEDIVIEIVKLFIEELADEIVVSLENF 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02401 695 PANTHER AFADIN 95 695 - -
Cca07g02401 695 PANTHER AFADIN 1 89 - -
Cca07g02401 695 MobiDBLite consensus disorder prediction 44 107 - -
Cca07g02401 695 Pfam Domain of unknown function (DUF4378) 536 687 IPR025486 -
Cca07g02401 695 MobiDBLite consensus disorder prediction 54 87 - -
Cca07g02401 695 PANTHER DUF4378 DOMAIN PROTEIN 95 695 - -
Cca07g02401 695 PANTHER DUF4378 DOMAIN PROTEIN 1 89 - -
Cca07g02401 695 MobiDBLite consensus disorder prediction 440 463 - -
Cca07g02401 695 MobiDBLite consensus disorder prediction 422 463 - -
Cca07g02401 695 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02401 Cca-Chr7 52687652 52692608 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02401 438 689 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 33.579 1.05e-35 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02401 - - gmx:100796503 904.434