Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02374 ATGACTCAGGCGGTGGAGGTGTTGAATCGGTATGGGACGGATCTGGTGGGGGAAGCGAGGGGTTCTGATTCAGACTGTTTGGCGGGTTTTGAGTGTTTTCTGAACATTGTGAGGGCATTGGGAATGGGATCGTGCATCTCCGAGGTTGGGGCTGGTGGTAGTTCTCCTCCGCTTCTTCCTTATTCGCTTGAATCCGATATGGATGGTGGGAAGCGGAAGAGGTTGAGGGCTTCCTCTTCCTTTGATTCCAAAGTGCCTGGGAGGATGTTCGTGAATGGCTCAAGCGAGGTTGCGTCTATGTATTGCAAGCAGGGAAGGAAAGGGATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGTTCAAAGGAAGACACCATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCACAGGGTTGCAAAGAAAGTTAGGGATTCTTTCCCTTTAAAGCTTAATGCCCAATGGGATTTGCATCAGAAGAATAGAGATGGACTCAGTGATAATAGCAGTGCCACAGGAAGTTATAAATCTGAAGGGAATGGATTTAGACTGGTTGACGAGAAAACTAGTCCCACTGATCATGAACATGATGAAACAGATACTATTTTGACATTAAGAGAATCTTTTTTGAAGGCTTGTAAGATTATGGACAAAGAACTGAAATTGCATCCTGATATTGACTGCTTTTGTAGTGGGACTACAGCAGTTACCTTGGTCAAGCAAGGGCTGGATCTTGTTATTGGAAATGTTGGCGACTCAAGAGCTATACTGTGTACCCGAGATCATGATGATTCTCTTATAGCTGTTCAGTTGACTGTTGACCTGAAGCCAAATCTTCCAAGGGAAGAAGAGAGGATCAGGCTTCGTAGAGGAAGGGTTTTTTCCCTTCAAAATGAACCTGAAGTGTCTCGGGTGTGGCTGCCTAACTCTGATTTCCCTGGTCTTGCTATGGCACGGGCATTTGGAGATTTTTGCCTGAAGGACTTTGGATTGATTTCTGTTCCGGATGTCTCATATCACCGCCTTACTGAGAAGGATGAATTTGTTGTATTAGCAACAGATGGGGTAAGGCCTATAAGGGTTTTTTTTCTTTTCTTTTGA 1110 0.4459 MTQAVEVLNRYGTDLVGEARGSDSDCLAGFECFLNIVRALGMGSCISEVGAGGSSPPLLPYSLESDMDGGKRKRLRASSSFDSKVPGRMFVNGSSEVASMYCKQGRKGINQDAMLVWENFCSKEDTIFCGVFDGHGPYGHRVAKKVRDSFPLKLNAQWDLHQKNRDGLSDNSSATGSYKSEGNGFRLVDEKTSPTDHEHDETDTILTLRESFLKACKIMDKELKLHPDIDCFCSGTTAVTLVKQGLDLVIGNVGDSRAILCTRDHDDSLIAVQLTVDLKPNLPREEERIRLRRGRVFSLQNEPEVSRVWLPNSDFPGLAMARAFGDFCLKDFGLISVPDVSYHRLTEKDEFVVLATDGVRPIRVFFLFF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02374 369 PANTHER ALPHABET, ISOFORM E-RELATED 42 360 - -
Cca07g02374 369 Pfam Protein phosphatase 2C 111 359 IPR001932 -
Cca07g02374 369 SUPERFAMILY PP2C-like 95 359 IPR036457 -
Cca07g02374 369 CDD PP2Cc 97 359 IPR001932 -
Cca07g02374 369 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 42 360 - -
Cca07g02374 369 SMART PP2C_4 91 367 IPR001932 -
Cca07g02374 369 ProSiteProfiles PPM-type phosphatase domain profile. 97 369 IPR001932 -
Cca07g02374 369 MobiDBLite consensus disorder prediction 163 201 - -
Cca07g02374 369 Gene3D - 91 360 IPR036457 -
Cca07g02374 369 MobiDBLite consensus disorder prediction 184 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02374 Cca-Chr7 52406058 52411878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02374 84 359 PP2C-type Phosphatase Gene Family AT1G16220 59.364 2.29e-120 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02374 - - gmx:100802479 677.552