Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02368 ATGACCATGGTTCCTTCTCAAAACGGGAAACAAAATAGGAGTAGTGGTGGTGGTGATTATGTTATTTACGGTAACACAACAACGAGTGGTGCTATGAACCAAGTTGAAGTTGAAGGAGGCTACAATTGCTTACTAGGATCTGATTTTGTGGTGAGGAGGCACATGATGGCTGAGCCTGAAGAATCATCGAGACACAACACCACCACTAACGAGGAAGCTGAAGCTGAAGCTGGTGGTTCAACCTCAAAGGAAGAAGAAGAAAAAGGAGCAAATTTAaacaacaataacagcaacaacaacaacaataacTGGCTTCAATTAAGCATAGGTTTGACAAGCACAAAGCAACAAGACCGTGATCGAACCGATCCAACAACAACAACAACCGGTTCAGGGCTTGTGGAGTTGGACTTGCTTCCTTCGCGGCGGAGCACGGAGATTCCGGCGGCGGTTTTTCCGGTGGTGGCATCAGGAAGAGGAGGAGGAGGGTCTAGTTTTGGTGTTTCTTCTTCTTTGTTTTTTGAGCATCAAACGACGTCGTGTTCTTCCATGTCCATGTCTACGGCAAGTGGTCCAATTTCCTCAACCTTTGGCCATCAAGAGATGAACTGGGCTTTTGGTCCACTATTTCCTCATAATTCTATGCCTATTATGCcctcttcctctttcactcttcctcctccttcttcttcttcctcctcatcACAGTCTTGTTACTCCTCTTTGAGGCCTCCCTTAGGGTCTTACTTTCCAACACCCTTTCATCCCTTTCCTTCTTCTTCTGGATTTGATCAATATGACGTGGCTGGGGCTGGACCAAGCTCTGATGTCACAGTTCGAGTTGTTGATCCTCCTAGAAGACCTCATTCCGGAATATGGTTCATGTTACAAGCTTCTCAAAATCAGGCGAAAGAACCATTCTTGCCTCAAATACCTAAGAACTACCTTAGAATTAAAGACGGAAGGATGACAGTTCGGTTGCTATTGAAGTATCTGGTTAGCAAACTCAGACTGGAAAGCGAATCAGAGATAGAGATAACATGCAGAGGGCAACAACTTTTACCTTTCTTGACGTTGCAGCATGTGAGGGATAACATTTGGACTCCGAGGGACACCACACGACCTTTGCTTTCAGATTCCTCAACCACAGATCATGTCATGGTGCTCCATTACGGTAGAATAAGCACTTCTTAA 1194 0.4213 MTMVPSQNGKQNRSSGGGDYVIYGNTTTSGAMNQVEVEGGYNCLLGSDFVVRRHMMAEPEESSRHNTTTNEEAEAEAGGSTSKEEEEKGANLNNNNSNNNNNNWLQLSIGLTSTKQQDRDRTDPTTTTTGSGLVELDLLPSRRSTEIPAAVFPVVASGRGGGGSSFGVSSSLFFEHQTTSCSSMSMSTASGPISSTFGHQEMNWAFGPLFPHNSMPIMPSSSFTLPPPSSSSSSSQSCYSSLRPPLGSYFPTPFHPFPSSSGFDQYDVAGAGPSSDVTVRVVDPPRRPHSGIWFMLQASQNQAKEPFLPQIPKNYLRIKDGRMTVRLLLKYLVSKLRLESESEIEITCRGQQLLPFLTLQHVRDNIWTPRDTTRPLLSDSSTTDHVMVLHYGRISTS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02368 397 MobiDBLite consensus disorder prediction 113 132 - -
Cca07g02368 397 MobiDBLite consensus disorder prediction 58 90 - -
Cca07g02368 397 PANTHER RING FINGER PROTEIN 1 394 IPR044171 GO:0007275
Cca07g02368 397 PANTHER RING FINGER PROTEIN 1 394 - -
Cca07g02368 397 MobiDBLite consensus disorder prediction 58 104 - -
Cca07g02368 397 Gene3D - 286 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02368 Cca-Chr7 52311878 52320589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02368 305 392 C3H Transcription Factor Family AT3G23060 38.043 2.16e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02368 - - gmx:102664960 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02368 07 52311878 52320589 Cca07g02368 07 52311878 52320589 ECH