Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02364 ATGTTTAGGAAAAGGCACACCCCTTCTCTTGCAAGGGAATTATTGGCATTTCAGCCGCTTTTTCTTCTCTTCTTGTTCAGCTTGCACCACCACACTGTACAGTGTCAAGGAAGGTTGAGTAAACATGTTTCTTCAGAGCCTCCTTCTCCTTCTAGGTCTTCACCATCACCACCATCATCAGGGTACAAGGATGACCCTAGGAAGATCATTTTGAGCATGGTTTTAGGAGCAGTTACCGGACTAGTTTTTTCTGTTTTCTTTGCTCTTGTGGTTCGATGTGTTGTTCAGTATCTGAACCGCACACCAATCCTCAAGGGCCCTGTTATATTCTCCCCCAAAATTGCCCCCAAGACACTCCAATCAGCTTTGGCAAAGGAAAACCACTTGCTTGGTTCGAGTCCGAATGGGAAGTACTACAAAACTGTGCTTGACAATGGACTCACTATTGCCGTCAAAAGGCTAACACCCTTCGAGAGCAATTCCCCAGAGGCCAAGAGAAAATCAGTGAAGAGGCAGATACAAGCTGAGTTAGAGCTTCTTGCAGGCTTGAGACACAGAAACTTGATGAGTTTGAGGGCCTATGTTCGCGAGGCTGAAGGGTTCTCATTGGTTTATGATTATGTTTCCACTGGGAGTCTTGCTGATGTGTTGAATAGAGTGAGGGAGAGTGAGTTAGCCTTTGGTTGGGAAGTTAGGCTCAGGATTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCACTTCACTTGTGTGCCTCAGATTCTGCACTACAACTTGAAGCCCACAAATGTGATGTTGGATGCTGAGTTTGAACCCAGATTGGCTGATTGTGGGTTGGCTAAACTTCTGCACAACTTGGATAGAGGAACATCTCTCTACACCCCTCCTGAATGTTTCCATAATTGCAGCAGGTACACTGACAAAAGTGACATCTTCAGTTTTGGCATGATACTAGGTGTTTTGTTAACGGGTAGGGACCCGATAGATCCATTCTTTGGAGAAGCAGCCAGTGGGGGAAGTTTGGGATGTTGGCTTAGACACTTGCAGCAAGCCGGTGAGGCTCGGGACGCTCTAGATAAGAGCATGTTAGGGGAAGAAGGAGAGGAAGATGAGATGCTAATGGCTGTTAGGATTGCAGCTGCGTGCCTTTCTGATATGCCTGCAGATAGGCCTTCTAGTGATGAGCTTGTTCACATGCTAACTCAACTGCACAGTTTTTGA 1221 0.4636 MFRKRHTPSLARELLAFQPLFLLFLFSLHHHTVQCQGRLSKHVSSEPPSPSRSSPSPPSSGYKDDPRKIILSMVLGAVTGLVFSVFFALVVRCVVQYLNRTPILKGPVIFSPKIAPKTLQSALAKENHLLGSSPNGKYYKTVLDNGLTIAVKRLTPFESNSPEAKRKSVKRQIQAELELLAGLRHRNLMSLRAYVREAEGFSLVYDYVSTGSLADVLNRVRESELAFGWEVRLRIAVGVVKGLQYLHFTCVPQILHYNLKPTNVMLDAEFEPRLADCGLAKLLHNLDRGTSLYTPPECFHNCSRYTDKSDIFSFGMILGVLLTGRDPIDPFFGEAASGGSLGCWLRHLQQAGEARDALDKSMLGEEGEEDEMLMAVRIAAACLSDMPADRPSSDELVHMLTQLHSF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02364 406 MobiDBLite consensus disorder prediction 39 62 - -
Cca07g02364 406 PANTHER - 11 406 - -
Cca07g02364 406 Gene3D Phosphorylase Kinase; domain 1 113 207 - -
Cca07g02364 406 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 11 406 - -
Cca07g02364 406 Pfam Protein kinase domain 126 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02364 406 SUPERFAMILY Protein kinase-like (PK-like) 127 400 IPR011009 -
Cca07g02364 406 CDD STKc_IRAK 130 403 - -
Cca07g02364 406 ProSiteProfiles Protein kinase domain profile. 124 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02364 406 Gene3D Transferase(Phosphotransferase) domain 1 208 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02364 Cca-Chr7 52253290 52256321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02364 70 403 Receptor kinase-like Gene Family AT2G31880 34.648 2.11e-59 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Cca07g02364 Pkinase 7.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02364 - - gmx:102664172 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02364 07 52253290 52256321 Cca07g02364 07 52253290 52256321 ECH