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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca07g02357
ATGTCTGAAATGGTTTCTGCTCTTGCTCAAGTTATGGGAACCACCAATCGGAACCCACACATGCCACAATCAACTTATTTTCCTCTCTCAACTTCAGTGGTCAATGATCAGCCTCAACCTTACCCATCTCATCCTCCTCTAGATCAAAAAGAAGTGACAAAGAAACCACACTACAGAGGAGTGAGGCAGAGACCATGGGGCAAATGGGCAGCAGAAATACGTGATCCCAAAAAAGCAGCCAGAGTGTGGCTGGGAACCTTTGAAACAGCTGAGGATGCAGCCCTTGCATATGACAAAGCAGCACTCAAGTTCAAAGGCACAAAAGCCAAACTTAATTTCCCTGAAAGGGTTCATCAAGATGCAACTTTTCTTCAACAAGCTCCATCAAACAAAAACATCATTCCCTTCCAAGCAACTGGCTCTGTTTCTTCTCTTGATGCTGTAACCCCTCACCCATTGTCCACACAACATGACCACCAAGTTTTCCCTAATCTCTTCCAATATGCACGGATTCTTTCAAGTGATGATTCACAGTTCCCTTATTACACATCACATCTTTTCAATCACCAACAACAAGAACAACCACCTTTGAGTTCTCAATTCTCTACCACTTTATCATCCTCCTCATCTCCCTCATCCTACTTCTACAACCAGCAACAACAATATGATGAACAAGGACATGATCACTCAGGCCAGTAG
699
0.4363
MSEMVSALAQVMGTTNRNPHMPQSTYFPLSTSVVNDQPQPYPSHPPLDQKEVTKKPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEDAALAYDKAALKFKGTKAKLNFPERVHQDATFLQQAPSNKNIIPFQATGSVSSLDAVTPHPLSTQHDHQVFPNLFQYARILSSDDSQFPYYTSHLFNHQQQEQPPLSSQFSTTLSSSSSPSSYFYNQQQQYDEQGHDHSGQ
232
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca07g02357
232
PANTHER
DNA-BINDING DOMAIN
29
225
IPR044808
GO:0003700|GO:0009873
Cca07g02357
232
ProSiteProfiles
AP2/ERF domain profile.
57
114
IPR001471
GO:0003700|GO:0006355
Cca07g02357
232
MobiDBLite
consensus disorder prediction
189
232
-
-
Cca07g02357
232
CDD
AP2
56
115
IPR001471
GO:0003700|GO:0006355
Cca07g02357
232
SUPERFAMILY
DNA-binding domain
57
115
IPR016177
GO:0003677
Cca07g02357
232
MobiDBLite
consensus disorder prediction
35
60
-
-
Cca07g02357
232
SMART
rav1_2
57
120
IPR001471
GO:0003700|GO:0006355
Cca07g02357
232
Gene3D
AP2/ERF domain
57
116
IPR036955
GO:0003700|GO:0006355
Cca07g02357
232
Pfam
AP2 domain
56
106
IPR001471
GO:0003700|GO:0006355
Cca07g02357
232
PANTHER
AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR-LIKE PROTEIN ISOFORM 2
29
225
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca07g02357
Cca-Chr7
52158938
52162730
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca07g02357
4
187
AP2-EREBP Transcription Factor Family
AT5G13330
48.691
1.31e-45
149
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2 or ERF-ERF
Cca07g02357
AP2
5.2e-15
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca07g02357
-
-
gmx:100796624
343.199
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca07g02357
07
52158938
52162730
Cca08g00236
08
3272304
3274236
ECH
Cca07g02357
07
52158938
52162730
Cca09g02708
09
52755045
52756869
ECH
Cca07g02357
07
52158938
52162730
Cca07g02357
07
52158938
52162730
ECH
Cca07g02357
07
52158938
52162730
Cca03g00273
03
3997562
4000065
ECH
Cca07g02357
07
52158938
52162730
Cca09g02350
09
48796705
48800011
ECH
Cca07g02357
07
52158938
52162730
Cca07g00740
07
11436554
11439395
ECH
Cca06g00332
06
9384301
9385746
Cca07g02357
07
52158938
52162730
ECH
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