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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca07g02352
ATGTTCCCTTCTTCTAATTACACCTCAGGCTCTTACCCTCGTTTCCCAtcttcttcttcttcttcGCAGTACCCTTCTTTTAGTTTCCTCCACCCTGAAAATTCTTCTGCCAGCAACACCTTCCTCCATGATCCACTTGCTGTTACTTACATCCCCTCTCATTACCACACTCCAATCCCTGAAACACTAGCCAATTGGGCAGTTGCAGACTGTGCTGCAATGCTGAACCAAGATCTCAGTGGTGGTGCCCTTTACGGCATCGCCAAGAAACCGGTGAAAAAAACCACCAAGAAAGACAGGCACAGCAAGATTCACACTTCTCAGGGTTTGAGGGACCGAAGGGTGAGGCTGTCCATCGAGATCGCCCGCAAGTTCTTTGATCTTCAAGACATGTTAGGGTTTGACAAAGCCAGCAACACCCTTGACTGGCTCTTCACCAAGTCCAAGAAGGCAATTAAGGAGCTAACTCTGAGCAAGCAAAGTGCTGATAGCTTCTCTTCATCTTCGGAGGGTGAAGTGGTTTCTATGATCCACCAAGACCTTCGACAACAACAGCGAAGGGTAGATTTGGAAGAAAGGATGTTGAAGGAGCCTGCTTATTGTGTCAAAGCAAAGATGAAGGAGTcaagggaaaaagcaagggcaagggcaagggaaaggacaagtagcaagatgtgcaacataagtggcgaagggaaggtgcaagAGTTGAAGAAAAAGTGCCCTGCAACTGAAAATCATCCTCAAATCCTGAACCAATTAAGGACACCCTCACCCCTTCAGCTTCATTCGCAAGATATGGGTGGTGAAGTGCCAAGAGATGATGAATTCAACGTTATTGAGGAATCCATTGTCATTAAGAGAAAGTTGAAACACGCCTTGATGTCTTCCATTCACCAAAACGTTGTGATCCCTAAGGAAGCAAGTGTAAGCAACAGTGACTACAACTCCTTCCCCAACTTGTGTCCAAATTGGGAAGCTAATAATGCTTCCACTGGACGCCCCGCCTTTTGTGCAATAGCAAGCATGAATCTATCTACAGGGCTTCATATTTTTGGAAAATCTTGGGAGGAGTGCACCAATCCTCATCCAAGCTAA
1098
0.4189
MFPSSNYTSGSYPRFPSSSSSSQYPSFSFLHPENSSASNTFLHDPLAVTYIPSHYHTPIPETLANWAVADCAAMLNQDLSGGALYGIAKKPVKKTTKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELTLSKQSADSFSSSSEGEVVSMIHQDLRQQQRRVDLEERMLKEPAYCVKAKMKESREKARARARERTSSKMCNISGEGKVQELKKKCPATENHPQILNQLRTPSPLQLHSQDMGGEVPRDDEFNVIEESIVIKRKLKHALMSSIHQNVVIPKEASVSNSDYNSFPNLCPNWEANNASTGRPAFCAIASMNLSTGLHIFGKSWEECTNPHPS
365
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca07g02352
365
ProSiteProfiles
R domain profile.
207
224
IPR017888
-
Cca07g02352
365
PANTHER
TRANSCRIPTION FACTOR TCP4-RELATED
18
364
IPR005333
GO:0003700
Cca07g02352
365
PANTHER
TRANSCRIPTION FACTOR TCP FAMILY-RELATED
18
364
-
-
Cca07g02352
365
ProSiteProfiles
TCP domain profile.
97
155
IPR017887
-
Cca07g02352
365
Pfam
TCP family transcription factor
95
226
IPR017887
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca07g02352
Cca-Chr7
52102017
52103221
Dispersed/Proximal
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca07g02352
52
328
TCP Transcription Factor Family
AT1G67260
34.797
1.74e-33
125
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
TCP
Cca07g02352
TCP
5.2e-41
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca07g02352
-
-
gmx:100786452
511.146
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca07g02352
07
52102017
52103221
Cca03g00731
03
14452771
14454446
ECH
Cca07g02352
07
52102017
52103221
Cca11g02102
11
46569339
46570765
ECH
Cca07g02352
07
52102017
52103221
Cca07g02352
07
52102017
52103221
ECH
Cca07g02352
07
52102017
52103221
Cca09g00438
09
10648652
10650630
ECH
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