Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02351 ATGGTGGAAGTGAAAGACCAAGCTCTGAATGCTAAACAGAAGAAAGAGAAGACCTCAAAAGCTGAAAGACGAGCTCTTCAAGAAGCTCAACGAGCTGCTAAGGCTGCTGCAAAAGCTGAAGGAAATAAGGCATCTGTAACTCTGGCTTCAGTGAATGTAAAACCAGCTAAAGCTGCAAAGCCCCCACAAAAAGTTGATAATGCTTCAGTTGCAGCCTCTGAGAAGAGGGGAGGTGATCGTCCACCAGAAAAAGATAGAAAGAAAGATGTTCCTCAGCCACGCATGCAATATGATGATAAGAGCAGAGTGGAGAAAGCCAAACGGCGTGCTGTGGTAAAACAGACTGAAGCTAGGAACAGAGTTGAACTGTTCAGGCATTTGCCACAGTATGAACATGGAAGTCAGCTCCCAGATCTTGAGGCAAAGTTTTTCCAGCTTGATTCTGTGCATCCTGCAGTTTATAAGGTAGGTTTGCAGTATCTGTCTGGAGATATATCTGGTGGCAATGCTCGTTGTATTGCTATGCTTCAAGCATTTCAAGAGGCCATTAAAGACTACCGAATTCCATCTGAGAAGACTCTTGTGAGAGACTTAACAGCAAAAATAAGTAGTTATGTTTCTTTCCTCATTGAGTGTCGACCACTTTCTATCAGTATGGGGAATGCAATTAGATTTCTCAAAAGTCGAATTGCCAAGGTACCTCTGACACTGTCTGAGTCAGAATCAAAAATCTCTCTTCAATCAGATATTGAGCGTTTTATAAGTGAGAAAATTATACTTGCCAACAAGGTGATAGTTAAGCATGCTGTCACAAAAATAAGAGATGGTGATGTTCTTCTTACTTATGGGTCATCATCGGCAGTTGAAATGATACTCTTACAGGCACACGAGTTAGGGAAACAGTTTCAAGTTGTAGTGGTAGACTCTCGTCCAAAACTTAGAGGGAAACTTTTACTTCGTAGGCTGGTGGAGAAAGGTCTTAGCTGTACATACGCTCATATAAATGCTGTATCCTACATAATGAACGAAGTTACTCGAGTCTTTATAGGTGCTTCGTCAGTGTTGTCAAATGGAACAGTTTATTCAGGAGTTGGGACTGCTTGTGTTGCAATGGTTGCCCATGCATTCCGCGTCCCTGTTTTAGTATGTTGTGAGGCTTATAAATTTCATGAAAGGGTACAGCATGATTCCATATGCTCAAATGAACTTGGTGATCCAGATGTCATCGCTACAGTTCGAAGTAGAGAGGATGTGAACCACTTGGAAGCGTGGGCCAATACTGAAAATCTGCAACTTCTAAATCTGATCTATGATGCAACACCTTCAGATTACGTTTCCATGATAATCACAGATTATGGCATGGTTCCACCCACAAGTGTACCTGTAATTGTAAGGGAATATAGCAGAGAACAGGTGTGGATATGA 1425 0.4182 MVEVKDQALNAKQKKEKTSKAERRALQEAQRAAKAAAKAEGNKASVTLASVNVKPAKAAKPPQKVDNASVAASEKRGGDRPPEKDRKKDVPQPRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFQLDSVHPAVYKVGLQYLSGDISGGNARCIAMLQAFQEAIKDYRIPSEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRIAKVPLTLSESESKISLQSDIERFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLQAHELGKQFQVVVVDSRPKLRGKLLLRRLVEKGLSCTYAHINAVSYIMNEVTRVFIGASSVLSNGTVYSGVGTACVAMVAHAFRVPVLVCCEAYKFHERVQHDSICSNELGDPDVIATVRSREDVNHLEAWANTENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPVIVREYSREQVWI 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02351 474 PANTHER TRANSLATION INITIATION FACTOR EIF-2B DELTA SUBUNIT 2 474 - -
Cca07g02351 474 SUPERFAMILY NagB/RpiA/CoA transferase-like 122 467 IPR037171 -
Cca07g02351 474 MobiDBLite consensus disorder prediction 1 111 - -
Cca07g02351 474 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 2 474 - -
Cca07g02351 474 Pfam Initiation factor 2 subunit family 165 457 IPR000649 GO:0044237
Cca07g02351 474 Coils Coil 12 32 - -
Cca07g02351 474 Gene3D - 260 467 IPR042529 -
Cca07g02351 474 MobiDBLite consensus disorder prediction 76 111 - -
Cca07g02351 474 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02351 Cca-Chr7 52079850 52086237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02351 7 474 Eukaryotic Initiation Factors Gene Family AT5G38640 76.793 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02351 K03680 - gmx:100785938 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02351 07 52079850 52086237 Cca07g02351 07 52079850 52086237 ECH
Cca07g02351 07 52079850 52086237 Cca09g00437 09 10557619 10565714 ECH