Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02347 ATGGGAGAAGAGGTGAAAACTGTACTAAAGCGTAGCTATGATAATTTTATTGACAAGGACTTGCAAAATTGGTTCTTATACTGTGCACTATTACCTCATGGTAATAAAGAGAATTGGGTTAAAAAGCTTGTTGACAGGGGACTATTGAATGGAAAGAGGAGTTTGGAGGAAATGATTGATGAGGGGTATGTGATACTAGATAAACTCATAAACCATTCTTTGTTGTTGCAGGATGGGTTGAATCCAAGAATGCATGATCTGGTGAGGAACATGGCATGCGATATAATGAAACACAAGTACATGGTAAAAATTAACAAAAAATTGGAAAAGATACCTGACATGCGGGAATGGAGAGATGATTTGGAGGCAGTTTCTTTGACGTTGAACGAAATAGAAGAAATTCCAGAGGGTGCATTGCCTAAATGTCCACGCTTGTCCACCCTAATTTTATCTTATAATCCCATCGGTCATATTCCAGACTCTTTTTTTACACACATGAATGCTCTGGCAGTTCTTGATCTATCATATAATACAAAATTAATATCATTACCGAATTCGCTGTCTAACCTGAGGTCTCTTATTTCTTTAGTGCTTAGAAGATGTGAAAATTTAAAAAATATACCTCCACTGGAGAAGCTACAAGCATTGTCAACATTAGTCATTTCATGGTGTCCCATCGACCAAGTACCGCAAGGCTTGGAAAATCTAGTAAATTTGAAATGCCTTGATTTGTCCCAGAATCGTTTTATACCATTACCAGTAGCAGAAGGTGTACTATCTCGTTTGACCAATATGCAATATTTGGATCTCAGCAGTTGTTCGATTAAAAAAGTAGAAGATGCAAAAGGGATGACTATGCTTGAATGTTTTCAAGGAGGCTTTCTGGACCGGGATAACCACAATCATTATGTCCAACAAATCTTTAACAACGGTTATGGACCTAAAACTTATCGTATTTATTTTGGAAAGTGCGACTACTACTGGTACCAAGAAGAAATTTTCCAAGAGTTTAATTTTCGAAGATTATTGTTTACAGACTGCACAGAAAAACCCTATTTACTGCCAAGAGACCTTGTGGATTTGAATGTATATCACAATAATCAATGGGAATACTTATGTGCTGCTTTGTCGTCTAAGGATCCTTCGTCTTTCAAAAAAATTTCCATTAAAGACTGCACAAAACTGAAGAGCTTGTTTTGTTTTAGTCTTTGTTCCTCGTGTAAGTTTATCCAAACGGCCATTTGCAAAGAATATGTTGCTGATTTTCACATGCTTACTCCTCAGACTCGGACAGAGGTGTTCCGTCATGTCGTGCATTTTGAAATCTCAGAATGCCATAAAATAGAGACGTTGCTGACATTAGAGTTAGTGCCATCACTTGCAAAGTTGGTGAAAATTCAAGTATGGGATTGTGATTCAATGAAGGAGATATTTGCAGCGAGTAACAGAGGTGTTGGTAGTATTACACTCCCCAAGTTGACCACACTGTATTTGTTTGATCTACCACAGTTGCATACAGTGTATGAAGGAGTTTTAGTCTGTGCATCTCAGAAAGTATTGAAGTCTTATTACTGTCCCATTTTAGAAAGGTTGCCTGAAATACAACTCCTTAAATTTAAAAATTTCTCAGGTGAAAATAGACCAGTTCTGGATTGGTCTACTAGAGTCAAGGTTGCTGCTGGTGCAGCTCGTGGAATAGCTTACCTGCATGAAGACTTGCTCCACACCTCCAACGCTATCATTCGAGTTGCAGTATTAATCAGCAATCACAACCACCAGCTGCTGGGAGGACATTATTTGGAAATAAATCATGGGTCGACGGAAAGTGGAGGTTTTTCAAGAATTAAAGCACATTTAGACAAAACACCAGGGAAAGGCATTGCTATATGCTCAGTTTATTGTGGCAACGAAGCAAGGCAAAACATCATTGGTTCCTCTTCAATGGATCCACAGGGTGCATTGAATCCATTACAAGGGCAAGTACCAGCTACCTCGGCTATCCTGCATTGA 2010 0.3851 MGEEVKTVLKRSYDNFIDKDLQNWFLYCALLPHGNKENWVKKLVDRGLLNGKRSLEEMIDEGYVILDKLINHSLLLQDGLNPRMHDLVRNMACDIMKHKYMVKINKKLEKIPDMREWRDDLEAVSLTLNEIEEIPEGALPKCPRLSTLILSYNPIGHIPDSFFTHMNALAVLDLSYNTKLISLPNSLSNLRSLISLVLRRCENLKNIPPLEKLQALSTLVISWCPIDQVPQGLENLVNLKCLDLSQNRFIPLPVAEGVLSRLTNMQYLDLSSCSIKKVEDAKGMTMLECFQGGFLDRDNHNHYVQQIFNNGYGPKTYRIYFGKCDYYWYQEEIFQEFNFRRLLFTDCTEKPYLLPRDLVDLNVYHNNQWEYLCAALSSKDPSSFKKISIKDCTKLKSLFCFSLCSSCKFIQTAICKEYVADFHMLTPQTRTEVFRHVVHFEISECHKIETLLTLELVPSLAKLVKIQVWDCDSMKEIFAASNRGVGSITLPKLTTLYLFDLPQLHTVYEGVLVCASQKVLKSYYCPILERLPEIQLLKFKNFSGENRPVLDWSTRVKVAAGAARGIAYLHEDLLHTSNAIIRVAVLISNHNHQLLGGHYLEINHGSTESGGFSRIKAHLDKTPGKGIAICSVYCGNEARQNIIGSSSMDPQGALNPLQGQVPATSAILH 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02347 669 SUPERFAMILY L domain-like 83 541 - -
Cca07g02347 669 Gene3D Ribonuclease Inhibitor 88 301 IPR032675 -
Cca07g02347 669 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Cca07g02347 669 Gene3D Ribonuclease Inhibitor 354 542 IPR032675 -
Cca07g02347 669 ProSiteProfiles Leucine-rich repeat profile. 144 165 IPR001611 GO:0005515
Cca07g02347 669 Coils Coil 114 134 - -
Cca07g02347 669 PANTHER DISEASE RESISTANCE PROTEIN RP 3 522 IPR044974 GO:0006952
Cca07g02347 669 PANTHER - 3 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02347 Cca-Chr7 52034631 52048287 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02347 546 572 Trihelix Transcription Factor Family AT5G38560 81.481 9.84e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02347 - - ccaj:109792499 734.561