Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02345 ATGCTTGCTTGCCAAGTGGTGAGAGCTTTAGATTCCTTAGATGAGTTTACGGATCTCAACCATGGCATGAAACCAGGACAGAGTTTGGTTTTCGATTCTGCACAGCAATCTGCACAAATCAGAATGTTTAGAAGGATGGCATTTGGGAGCCAAGATAATTCATCTTTCTTCAATGAGTCTCAGAGTAGCTGGAGGAGTAGAGATCACGACTCAACAACTAAATTCTCACAAAATAAATCTGGGCCTTGGAACAGTTGCAGCATTAATCAGCAATCACAACCACCAGCTGCTGGGAGGACATTATTTGGAAATAAATCATGGGTCGGCGGAAAGGTGATCCAAAGTACACGAATGAAGTCATCATCATCGAAAAAAACAAGAGATGGAAGTTTTATTGTGGCAACGAAGCAAGGCAAAACATCATTGGTTCCTCTTCAATGGATCCACAAGGAGCATGAAATCCATTACAAGTGGCGGAAGGTGATCACCAAATGA 495 0.4222 MLACQVVRALDSLDEFTDLNHGMKPGQSLVFDSAQQSAQIRMFRRMAFGSQDNSSFFNESQSSWRSRDHDSTTKFSQNKSGPWNSCSINQQSQPPAAGRTLFGNKSWVGGKVIQSTRMKSSSSKKTRDGSFIVATKQGKTSLVPLQWIHKEHEIHYKWRKVITK 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02345 164 MobiDBLite consensus disorder prediction 75 99 - -
Cca07g02345 164 MobiDBLite consensus disorder prediction 59 101 - -
Cca07g02345 164 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 4 63 - -
Cca07g02345 164 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 4 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02345 Cca-Chr7 52026661 52033209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02345 5 68 Trihelix Transcription Factor Family AT5G38560 74.627 8.65e-24 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02345 - - gmx:100790988 151.754