Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02317 ATGCAAGCCAGAGAGATCACAGGACTGAATTATATACTCCCTTCAGACCCTTGTCCTTTCCCAAGTCACTACAACATGATTGAGAACACCATCCCCACATTTCAACTCCACAAACTCTCAAACCAATTCTATGGTCTCCAAAACTCTCCTCAAGTGGCTGCGGACTTCAGCCCCCCTCAGTCCTCATGCATCAGCAGCAACTCAACCTCTGATGAAGCAGATGAGCAGCAGCAAAGCCTCATCAACGAGAGGAAGCACAGGAGGATGATATCGAACCGCGAATCGGCGCGAAGATCACGCATGAGGAAGCAGAAGCACCTTGATGAGCTCTGGTCACAGGTGGTGTGGCTCAGGAATGAAAACCACCAGCTGATGGACAAGCTGAACCATGTATCTGAGTCACATGACAGAGTTGTGCAAGAGAATGTTCAGCTGATAGAACAAGCCTCAGAACTACGCCAAATGATATGTGACATGCAGCTACATAGTCCATCATACACTCCTCCTTCATTGAGTCCAATTGATGATGATGTCTCTCCCTATGTCAAATCTGATTCATCAATCACAGGCTCCGTGGACCTGCTTGGTTGA 591 0.4788 MQAREITGLNYILPSDPCPFPSHYNMIENTIPTFQLHKLSNQFYGLQNSPQVAADFSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSESHDRVVQENVQLIEQASELRQMICDMQLHSPSYTPPSLSPIDDDVSPYVKSDSSITGSVDLLG 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02317 196 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Cca07g02317 196 MobiDBLite consensus disorder prediction 55 78 - -
Cca07g02317 196 Gene3D - 82 137 - -
Cca07g02317 196 PANTHER BZIP TRANSCRIPTION FACTOR 1 196 - -
Cca07g02317 196 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Cca07g02317 196 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Cca07g02317 196 MobiDBLite consensus disorder prediction 55 76 - -
Cca07g02317 196 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 196 IPR044521 -
Cca07g02317 196 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Cca07g02317 196 Pfam bZIP transcription factor 84 134 IPR004827 GO:0003700|GO:0006355
Cca07g02317 196 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02317 Cca-Chr7 51710801 51711842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02317 43 180 bZIP Transcription Factor Family AT3G30530 63.121 7.85e-50 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca07g02317 bZIP_1 7.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02317 - - gmx:780548 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g02317 07 51710801 51711842 Cca07g02317 07 51710801 51711842 ECH
Cca09g00371 09 8830218 8831390 Cca07g02317 07 51710801 51711842 PCT