Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02287 ATGTTTTTGGTAAGTGACAGGGAAGTAGTACTAGTAAGTTTCAGAATAATAATGTTTGTGAAATGTTGTTTTGGCGAGGGAAATTCAAGTGGTAGTGGCAGAGGGTATCCAACAGTAATCCAAGAGCTGTGCCGTCCTTTTTCTCTGTCTGATCTTAAGAAAGCAACCAACAACTTTGATGAAAAGAGAATAATTGCAAGAGAAGGATTTGGTGAAGTATACAAAGGTTATTTCCGACATAATGATGCTTCTCATTATGAACTCGCAGTGAAGCGATTTAATATTGTGACAAAATATCGTGAACGGGAAGAACAGTTCAagaatgaaatagagttgctctgccagcttggtcaccctaatatcatctctcttataggattctgcaaccacaaagatgagaagattggtgtgttcgagtacatgtccaatggatctctagatcaacacctgcatgcactgtcatggaaggaaaggctagagatatgcattggagcagcgcgtggactacactaccttcacgccggattgaagcgcaccatcattcaccataatatcaaacctagcaacattcttttggatcacaacatgcacccaaaaatcacgaatttcgaccttAGCGTAAAGGGAGCACATTTTATGACAAAGCCTAAACCAATTCAAGTATTGCCTAGAGGTACTGTTGGCTACGCAGCTCCGGAGCATGTCATGGAAGGTACCGTGACAGATAAATGTGATGTTTACTCATTTGGTATAGTTCTACTAGATGTTGTGTGGAGAAGAACAATTTTCGACATTGTAAGAGAAGGAGAAGCAAGAGATTTTCTGGAGAAGCCTGTTGAGGAGAATATTGATCCAAATATGATTGGTAAGATTGCACCGGAGTGTTGGCAAGTGTTTGCAGATATGATGGTAAGATGCTTGGAATATGAAGCTGATGAGAGACCAACAATGGGTGAAGTAGAGGTGGAACTTGAGCGTGCTTTGTCGTTACAAGAACAACAAGATATCGCAAACACCAACGGTTCTTATACCTTAATTTCCACCACCATTATTCCCAGCGAAGATATATGGGTGAATATATGGGTGAACGGCGGAACCGATTCTATTATAGCGATTCTGAATAGTATTGTATCCGTAGGTGATCAGACTAGCTGA 1155 0.297 MFLVSDREVVLVSFRIIMFVKCCFGEGNSSGSGRGYPTVIQELCRPFSLSDLKKATNNFDEKRIIAREGFGEVYKGYFRHNDASHYELAVKRFNIVTKYREREEQFKNEIELLCQLGHPNIISLIGFCNHKDEKIGVFEYMSNGSLDQHLHALSWKERLEICIGAARGLHYLHAGLKRTIIHHNIKPSNILLDHNMHPKITNFDLSVKGAHFMTKPKPIQVLPRGTVGYAAPEHVMEGTVTDKCDVYSFGIVLLDVVWRRTIFDIVREGEARDFLEKPVEENIDPNMIGKIAPECWQVFADMMVRCLEYEADERPTMGEVEVELERALSLQEQQDIANTNGSYTLISTTIIPSEDIWVNIWVNGGTDSIIAILNSIVSVGDQTS 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02287 384 Pfam Protein tyrosine and serine/threonine kinase 63 322 IPR001245 GO:0004672|GO:0006468
Cca07g02287 384 SUPERFAMILY Protein kinase-like (PK-like) 35 327 IPR011009 -
Cca07g02287 384 Gene3D Transferase(Phosphotransferase) domain 1 141 349 - -
Cca07g02287 384 PANTHER TYROSINE KINASE FAMILY PROTEIN 30 347 - -
Cca07g02287 384 ProSiteProfiles Protein kinase domain profile. 59 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02287 384 Gene3D Phosphorylase Kinase; domain 1 32 140 - -
Cca07g02287 384 PANTHER OS07G0166700 PROTEIN 30 347 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02287 Cca-Chr7 51385041 51386583 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02287 24 335 Receptor kinase-like Gene Family AT3G51550 38.671 2.77e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Cca07g02287 PK_Tyr_Ser-Thr 8.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02287 - - gmx:100305392 431.024