Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g02285 ATGCGTAAATACAGGACGAGCATATCAGGATTGGATTGCCGAGTAAAGGTCAAGTTTGTTTGTGGTGTCACCGAAATTATGTTTCTGAAATGTTTTGGTGACAGAAATTCAAGTGGTATTGGTAGATGGTATCCAACTGTAATACAAGAGCTGTGTCGTCAATTTTCTTGGACTGATATTAAGAAAGCAACTAACAACTTTGATGAAAAGAGAATAATTGGAGATGGAACATTTAGTAAAGCATATAAAGTTGCAGTGAAGCGATTTAAAGTGGAACGCCCTGATGGATGGGGAGAGTTCACGACTGAGGTAGAGTTGCACTGCCAACTTCATCACCCTCATATAATCTCTCTTATAGGATTCTGCATCCACAAAAAAGAGAAGATTATCGTGTTCGAGTACATACATGCCCAATGGATCTCTACATGGACACCTGCAAGGTGGGAAACTGTCATGGAAGAAAAGGCTAGAGATTTGCATAGGAGCAGCACGTGGACTACACTACCTTCACGCAGGAGCAAAGCGCACCATCATTCACGCACCATCATTCACCGTCACATCAATGTTAGGTACAGCTGCGTACAGCTGCCACCACCTTTCGGTAAATCATATTTGACCCCAGTTAAGCCTATTGAGGAGGATATTGATCCGAATATCAAGGGTAAGATTGCACCGGAGTGTTGGCAAGTCTTTGTAGACATCATTGCAGGATGCTTGAAGAATGAACCTGATGAGCGACCAGCAATGGGTGAAGTACAAATGCAACTTGAGCATGCTCTGTCCTTGCAGAAACAAGCAGATATCACAAACACCAACGGTTGTTATACCTTAATTTCCACCACCATTATTCCCAGGGAAGATAGATGGAACCCATTCTACGATAGCGAGTTGAACAACGTACTATATCGGTGTTCAAGAATGGTGGTCTGGAATATACTTTGGACTCACGTAAGATTGAGAATGGTTTTTCCAATTCATCAATGGACAAAGTTCTACACTTCTACAAGCCACTTTAGAAGTGGAGTGTTCTGA 1032 0.4215 MRKYRTSISGLDCRVKVKFVCGVTEIMFLKCFGDRNSSGIGRWYPTVIQELCRQFSWTDIKKATNNFDEKRIIGDGTFSKAYKVAVKRFKVERPDGWGEFTTEVELHCQLHHPHIISLIGFCIHKKEKIIVFEYIHAQWISTWTPARWETVMEEKARDLHRSSTWTTLPSRRSKAHHHSRTIIHRHINVRYSCVQLPPPFGKSYLTPVKPIEEDIDPNIKGKIAPECWQVFVDIIAGCLKNEPDERPAMGEVQMQLEHALSLQKQADITNTNGCYTLISTTIIPREDRWNPFYDSELNNVLYRCSRMVVWNILWTHVRLRMVFPIHQWTKFYTSTSHFRSGVF 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g02285 343 SUPERFAMILY Protein kinase-like (PK-like) 57 261 IPR011009 -
Cca07g02285 343 Gene3D Phosphorylase Kinase; domain 1 41 134 - -
Cca07g02285 343 PANTHER OS07G0166700 PROTEIN 210 279 IPR045272 GO:0004714|GO:0006468
Cca07g02285 343 PANTHER OS07G0166700 PROTEIN 42 139 IPR045272 GO:0004714|GO:0006468
Cca07g02285 343 Pfam Protein kinase domain 68 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca07g02285 343 Gene3D Transferase(Phosphotransferase) domain 1 190 280 - -
Cca07g02285 343 PANTHER TYROSINE KINASE FAMILY PROTEIN 210 279 - -
Cca07g02285 343 PANTHER TYROSINE KINASE FAMILY PROTEIN 42 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g02285 Cca-Chr7 51367920 51374862 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g02285 211 274 Receptor kinase-like Gene Family AT3G51550 39.062 2.11e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Cca07g02285 Pkinase 7.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g02285 - - gmx:100819625 184.496